XLOC_010363


Basic Information

Item Value
gene id XLOC_010363
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 346263 ~ 353780 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022069
atattttctcattATTCTGCTTTATCTGTATAGTCATGGACACACTTGTTtctagagcaagtagtttgaccgtttattattcctagtcattatccaataggcaactgaacaggaagttctaaaacaatcgcaatgACTAGCGAgcttctgcattttagaataaggtcgcTTTAGAATAAGCTTTTACCGTGAGCACGGCTTAATGAATGTCTTAATGATTTCTATGGAGAGagtcaaggtggcgcagtgggtagcactatcacctcacagcaagaagatcgctgggtcagctggtgtttctgtgtggagtttgcatgttctccccgtgttggtgtgggtttcctctgggtgcttcggtttcagtccaaacacatgcgctataggggaactgatcaactacactggccgtagtgtataagtgtgaatgagttttatggatgtttcccactagtgggttgcagctggaaagtcattcactgcataaaatatatgctggaatagttggcggttcattccgctgtgatgtcCCCTGATAcataaggcactaagctgaaggaaaacgaatgaatgaatgaatgatgatccGTTGCGCAGTTCAGTTGTAAAGTTTACCTGTCAGCAGCAGATTGCTAAGCTCTACTGGTGAACTTTGCAATTGCAATGTGTGAAATGCCAAATTAGGCAAACTTATGACATGGAACAGATTGAAATATGATGCGTAATGATATTTTTCCAGTACTGGTATACCACACATGCCTATTCCAAAGCCTTCTCATGATGTGAATCAGGCCTTCAGAGGAATTGAGCATGAATGTTCAGATGAGGTGTGATGTGCAGTGTTGTCTGTACACAGGCCTGAGGTTCAACCCCTGTCACACTTCTCAACACGCCAATCTGCAAAGCCCCTCATTAATATGCAAATCACATGCATTTTCGTTCCCATGCACCACAaggagagcaaaaaaaaaaaaacgaaacataAGAAAAGTTCCAGAGAAACACAATGCATATTTGATGCACCATGTGCTCCAACAGAACGATCAACTGGAATTTAATTGGTCTGGACATTACAGGTTTAAAAATTTAAAGGTGTGAGACGTCTTTAATAAAGCAGCCGTATTATCCGGGATCACATGCTCTGGAGACAGACAAGCGTGGGGTCCGTGACCTTTCGCATCGGCGTACACGTCAACAGGCCAAGCTTTCTGACCGGCGCTCATGAATATTGTAATGAGCTCCTCGACGCCGGCCGTGTCTCAATACATGGCTGAGCTTTAAGGGAGCGGGTGACATGACACCAGCATACGGCAGGGTCCCCGAGCCCACTCATTAACCCCTCTCCGTCCCGCACATCAGCCCACATGAGGGACAGAGACACTGTTTAATTGGTGCATGTGATATTTGGAGTGAGCCGCCGCGGGTGCAGAACAGCTGCTGGCGGTGACATAATGAGGGTGGATGTGAAACCCGGCTGGATTAGTGAACGCATGAGACTTGATGACTGCTGAGTGGAGAGGACAGGTGAGCCGTGAACAACCCTGTCCGATTCTGCAGGAAATGTGAGCGCTGAAAACTGGCCTGACAGTTGCTATGTTCTTGATAACCTGCTCTGAGTGATTGTCAAGGTGTTGCCGGGGCGCTCGCCGACTCACTCCACAGCATGTGTGTTCGTATAAGAAGGGGAAATCGTGTTTGCACACAGCTCAATGGCAGTGAAGCACCTAGTGGCTGAAATATGCACTGCAGTCCTAATTTAAAACTCCTCTCGACACatatgcaggttgccagattgatgataTAAACAGAAGCGAGCGGGACTGACTGAGCGTTACACTGCAAGCCCCTCAGTTAATGTTAATGATATTTGTATTAGTTGCTAATTAAATATCACCTCATGTGTATTTTAATGAATCTCAATCTGCGTGTCATACTGGAGGCTGCTGCTGTCCTCTAGAGGGCGCATGTTGGCTGCGTCTGCATACATTAAGAGCCCtgaaattaaatatgttgttTTCCACCGAGGTGCTGAAATGTAATTGGCTAAATTGGCAGTGGGCGGAGTTACAGAGATCAAAACAAAGAGATTCCGAAACAGAACACGCATATTCATAATAACTGACTTTTTgcatagttttttaaataaacaaactttgTATCTTGCTCTTTCATTGGCTGTAGGTTTATAACTCCTCCCCAAATCTCCAGCAGCTTTGCGTCTGGCTTTCTCATTGGCTATAGATCTTTGACTCCTCCCTAAACCTCCTGCAGCTCTTCATCACACTCTCTTATTGACGGTAAGGTTATAACTCCTCCCCAAACCTCTCGCAGCACTTTATTTcactctctcattggctgtagTTCTTTGACTCCTCCCTAAACCTCCCGCTGCTCTTCATCTcactctctcattggctgtaggtcttTGACTCCTCCCTAAACTTCCCCATGCACTATATATTGCGCTCTCATTGGCTATAACTCCTTCCCAAACCTCCTTCTGAACTGTATCTCACTTTCTTATTGGCTGTAGGTCTATAACTCCTCTAGATTCCCAGCTGCCCTGAATCTCACTCTCTCATTGGTTGTAGGTCTTGGACTCATTCCTAAACTTTCATCTCCACTAAATAgtgctctctcattggctataGCTCCTCCCCAAACCTCCTGCTGATCTGCATCCTGCTTTCTCATTGGCTACAAGTCTATAACTCTACCCCAAACCTCTCACTCATTTGCATATTGTGCTCTTATTGGCTGTAGAACTTTGACTCCTCCCTAAATCCCCAGCTGCACTGTATATCAGTCTCTTATTGGCAGAAAGTCTATAACTCCTCCCTAAACTTCCAGCTGCTCGGCATCTCGCTTGCTTATTGGCTATTAGTCTCTAACTCCTCCCCAAACCTCTCACTTTGCATCTCATGCTCTTATTGGCTGGAAATTTTGACTTCTCCTCAAACATTTtagctgaaaacaaaaaaatcataattctgagactttcccagggatgggttgcagctggaagggcatctgctgcataaaaaaacatgctggataagttggcggttcattccgctgtggcgaccccggatcaataaagggactaagctgacaagaaaatgaatgaatgaataattctgaGACACAATTCTCTTTCTGTCAGCCAGGAGCTTCCCTCTCACACAGATTCAGACAGAAGTTCAGTGTTCACGGAGGTCAAACTGCTGTATGAACGTCTCCTATCACACATTACCACTGAAATAATAACCAGCCTCCGCCGCCAGGCATATTTCAGCAGTAAAGGTTACTGACCGCTGTCAGCACGAGCTCTGTAAATCCATGAAGAAAACACTGATTTAATCGACACAGTCAGGATCATTGCGGACGCCTCAGTGATTCGGGAAGATTTTACAGCACAATCTGTACATTATGTGTATTCTCCGCTCATCTCTGCTGGCGCAGCGTCTGGCCGGTGTTTTATCAGCGTGTATTCCCTGGGAATCAAACCCATGATCTCGGTGTTGCGGGTGTCATGATCTCACGGCTGGACTATTTATTTGACCTGTCAGGAGCAGCACTATCTAGAacacagagatacacacacacacacacatctacaactGCACCGAGCTTCATACAGCACATagacactatttattttttcctcaacaaGAGATGGTGTGCATCAATCAACGTTCATTAATCTACCCAACGTAGCTCAAAGTCTAGTTTTCATTGGTGGTCCCTTagagtgtactcacactatgtgcTGTTGCCTAGAACGACCGAAGCACTGCTTTTCCGCTGTTATCAGATTGCCAAGTGGCTCGCTGCATACGTcagaggatttgagatgcagaatgGAATTGACCATGAAGACGGGGTTCGAgactggtgaagaatggttccagaaagcaggaaagataaaaacaaaaggcaaaaaataaaataaacaagtaaataacagagtgagaatgtggtaacagCAAAAAAATGTGATATAAATCAAGCGGtcatgagggcttttctttttctggattgcatttgaaaacactatcagttgggtttagggaaggaggaacgTCATTCAgttagtcggtcagtcagtcagtcaacagcggcctctggtggacgtatgtgagaacagcaggcgtgaatggcactcacaagagaaatttgatctgaaaaagtgtacacagcaccctctggtggattcagaaagcaaaaactgctaaaatatacctcctgggacgtatttggcgctctccagaaatggaATCAGGGGCATGTAAACGGAAGGAGCATGGCATGCATAATAGATCATTCAACACACTTCAATTTAACACTATTATCAATCAATTATGCTATTGTTAAACTAACTGCAGCAGTGGAAATAACCGCATCATTCTAAACACACATTTCACTCGGATACACAGGCGTTTCAGCACAAGAGTGTTTTCTGAAGCGCCTCATCGATCTGTGAAAGTAAAGTTGAGCCATTTTCCCAGCGCCTGCGCTTTCCTCAAGCACATCTCCGGCTGTGACATTATAAAAGACGCCTGTTTGCCCCATGCACGATTCAGGAATAGCACAGCGAAATAAAATGGCGCGCAGACAGGAGATGGAGCGGCCGCTGATGAAACAGAATGCAAATGAAAAACAGGTGAGAAACGCAGAGCATCTCCCAGCATCTGCCTCTGTCTCTCCTCCAGAAACATCCATCCAGAAACACACGACATTTTCCCCTCATCAGCCGCGCGCTGACAACACTCTGTCACAGCCGGGCAAATTACAGTCGCCCACCAGGAGAGAAGAAGAGAAGAGGGAGAGAGACAGAGCTTGTAAACGGGAAATGGAGGAGAGAGTCGCAGAGATCTTGCACAGACAGACGGAGACGGTACAGACGCAGGACAAATATTTGATAGCCATGCTGTCACCGCTTCTACCAAGACGAGGAAATTGGCTTGACAGGCGCAGCgcagggtgtgaattacagggggTTTCTGGGGTGTTTGACCCCCTTATTTAATGCTTGATCCCTCCTGAAGGacgtcaaaatgattcgccctcctctACAAATTTAATTCTTCTTAAAATCTCTCCAGAGTGCTGTTTAATGATGCCAACCATTCAAGACCTCCAGGACAGCACACacacttaatacacacacacacacacacacacacacacacacacacacacacacttcactgaaTATATATACATGGACATCATcccctatatactatataactgcaggttaactgtgtttatatttaactgttaaaagctattaattACTAGTTAAATATAGTTATAAGTTACAAATATCTAATTAGTAACTACTAACGACACTgattttattatagccaaaataaaacaaataagactttgttggTCTGCATCTAgagtctgaataatgtgcaggttagtgtatactccatcagctgtttctgactccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctgaataatgcacaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgcacaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctcaataatgcgcaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctcaataatgcgcaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgttactgactgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgtctgtctccatctagagtctgaataatgtgcaggttagtgtatactccatcagctgtttctgtctgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgactgtctccatctagtgtctgaataatgtgcaggttagtgtatactccatcagctgtttctgtctgtctccatctagtgtctgaataatgcgcaggttagtgtatactccatcagctgtttctgactgtcttcatctagtgtctgaataatgcgcaggttagtgctGATTAACCTGTCAGGCGTTATTCTGAGAAAACAACCTCCTAAATGTGTTTCATCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022069 True 7114 lncRNA 0.44 2 346263 353780

Neighbor

gene id symbol gene type direction distance location
XLOC_010362 NA coding downstream 32710 302755 ~ 313553 (-)
XLOC_010361 LO017917.1 coding downstream 65428 277789 ~ 280835 (-)
XLOC_010360 slc6a3 coding downstream 82605 248239 ~ 263658 (-)
XLOC_010359 NA coding downstream 106990 227820 ~ 239273 (-)
XLOC_010358 NA coding downstream 140004 204125 ~ 206259 (-)
XLOC_010364 NA coding upstream 1066 354846 ~ 367144 (-)
XLOC_010365 irx4a coding upstream 24986 378766 ~ 383664 (-)
XLOC_010366 NA coding upstream 197902 551682 ~ 552627 (-)
XLOC_010367 irx2a coding upstream 201966 555746 ~ 563732 (-)
XLOC_010368 NA coding upstream 850362 1204142 ~ 1218570 (-)
XLOC_010626 CR392024.2 misc upstream 20541332 20895112 ~ 20895175 (-)
XLOC_010357 NA non-coding downstream 168400 173564 ~ 177863 (-)
XLOC_010356 NA non-coding downstream 278556 66537 ~ 67707 (-)
XLOC_010369 NA non-coding upstream 997191 1350971 ~ 1353006 (-)
XLOC_010372 NA non-coding upstream 1594245 1948025 ~ 1949069 (-)

Expression


Co-expression Network