G264172


Basic Information

Item Value
gene id G264172
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 4406032 ~ 4406271 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU299845
TCTGAAGTGAAACGATGCGTTTGTGTAAGGAAAATATTAATATTTAACAGGTTATAAAGTAAAATATCTAGCTTCTGCCTTACAAAGAAAGTGTAACGCCTCTCGCAGTTCAAAATGCTTACGCTATGTCCTATGCCTTCCGTATTCAACTATGAAAAAACACGTCACGTCAGTTGCGCTTTTTCCATAAGTTGAATACGGAAGGCCTTTATTTACCCCCCGGAGCCATGTGGAGTGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299845 True 240 lncRNA 0.40 1 4406032 4406271

Neighbor

gene id symbol gene type direction distance location
CI01000063_04345980_04349791 BAMBI, BAMBIA coding upstream 55796 4345980 ~ 4350236 (+)
CI01000063_04310020_04338879 WACA, WAC coding upstream 67014 4310020 ~ 4339018 (+)
CI01000063_04168036_04180451 NA coding upstream 225516 4166544 ~ 4180516 (+)
CI01000063_04026940_04034428 RAB18B, RAB18, RAB18.S, RAB18A coding upstream 371329 4026940 ~ 4034703 (+)
CI01000063_03991410_04022994 AFAP1 coding upstream 382333 3991301 ~ 4023699 (+)
CI01000063_04479946_04487899 MTPAP coding downstream 73553 4479824 ~ 4487907 (+)
CI01000063_04524187_04533040 NA coding downstream 117183 4523454 ~ 4533366 (+)
CI01000063_04544999_04552162 NA coding downstream 137771 4544042 ~ 4552265 (+)
CI01000063_04568412_04568747 NA coding downstream 162013 4568284 ~ 4569210 (+)
CI01000063_04594405_04629754 SVIL coding downstream 188134 4594405 ~ 4630452 (+)
G264171 NA non-coding upstream 1689 4403872 ~ 4404343 (+)
G264162 NA non-coding upstream 5565 4394868 ~ 4400467 (+)
G264142 NA non-coding upstream 60311 4345434 ~ 4345721 (+)
G263947 NA non-coding upstream 548963 3856734 ~ 3857069 (+)
G263941 NA non-coding upstream 598233 3805499 ~ 3807799 (+)
G264174 NA non-coding downstream 3417 4409688 ~ 4410067 (+)
G264177 NA non-coding downstream 5882 4412153 ~ 4412491 (+)
G264188 NA non-coding downstream 31386 4437657 ~ 4438014 (+)
G264197 NA non-coding downstream 54434 4460705 ~ 4460934 (+)
G264200 NA non-coding downstream 56978 4463249 ~ 4463630 (+)
G262436 NA other upstream 1691515 2713615 ~ 2714517 (+)
G262423 NA other upstream 2163067 2241408 ~ 2242965 (+)
G262194 NA other upstream 3261025 1139352 ~ 1145007 (+)
G262060 NA other upstream 3695478 710110 ~ 710554 (+)
G261984 NA other upstream 3738650 665800 ~ 667382 (+)
G265391 NA other downstream 1507512 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1929007 6335618 ~ 6338283 (+)

Expression


Co-expression Network