G264174


Basic Information

Item Value
gene id G264174
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 4409688 ~ 4410067 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU299847
TGAACATTTAGATCATTTTCTTGAGTTATACATATATAAATTGTATACTGAACACACTTTATAGACAGTTGACAGTTGTATAATGGGTGGCCCCACAAAAGGCCTTTTACGAAAAGATAGACAAAGAATGTGTATGTGTGCGCATGTGCGTGTATGTGTAAGATGGTGAAAAAAAGAGCACTTAGCTTTAAAGTGCTTTTCCGTACTAATGGAGGAATATTTTGTGTGGTTTAAGGAAAAGCTTCCATTTCGACTAATGAACCCAGGTCATGTAAATATTTAGACACCAATCCAAACTATATCCAGACATGTATAGTGCCCTAAAAAGCCCCGACTATCACACATGCACCCGCCTCCTCCAACAGCAGCAAACATAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299847 True 380 lncRNA 0.38 1 4409688 4410067

Neighbor

gene id symbol gene type direction distance location
CI01000063_04345980_04349791 BAMBI, BAMBIA coding upstream 59452 4345980 ~ 4350236 (+)
CI01000063_04310020_04338879 WACA, WAC coding upstream 70670 4310020 ~ 4339018 (+)
CI01000063_04168036_04180451 NA coding upstream 229172 4166544 ~ 4180516 (+)
CI01000063_04026940_04034428 RAB18B, RAB18, RAB18.S, RAB18A coding upstream 374985 4026940 ~ 4034703 (+)
CI01000063_03991410_04022994 AFAP1 coding upstream 385989 3991301 ~ 4023699 (+)
CI01000063_04479946_04487899 MTPAP coding downstream 69757 4479824 ~ 4487907 (+)
CI01000063_04524187_04533040 NA coding downstream 113387 4523454 ~ 4533366 (+)
CI01000063_04544999_04552162 NA coding downstream 133975 4544042 ~ 4552265 (+)
CI01000063_04568412_04568747 NA coding downstream 158217 4568284 ~ 4569210 (+)
CI01000063_04594405_04629754 SVIL coding downstream 184338 4594405 ~ 4630452 (+)
G264172 NA non-coding upstream 3417 4406032 ~ 4406271 (+)
G264171 NA non-coding upstream 5345 4403872 ~ 4404343 (+)
G264162 NA non-coding upstream 9221 4394868 ~ 4400467 (+)
G264142 NA non-coding upstream 63967 4345434 ~ 4345721 (+)
G263947 NA non-coding upstream 552619 3856734 ~ 3857069 (+)
G264177 NA non-coding downstream 2086 4412153 ~ 4412491 (+)
G264188 NA non-coding downstream 27590 4437657 ~ 4438014 (+)
G264197 NA non-coding downstream 50638 4460705 ~ 4460934 (+)
G264200 NA non-coding downstream 53182 4463249 ~ 4463630 (+)
G264164 NA non-coding downstream 55322 4465389 ~ 4465946 (+)
G262436 NA other upstream 1695171 2713615 ~ 2714517 (+)
G262423 NA other upstream 2166723 2241408 ~ 2242965 (+)
G262194 NA other upstream 3264681 1139352 ~ 1145007 (+)
G262060 NA other upstream 3699134 710110 ~ 710554 (+)
G261984 NA other upstream 3742306 665800 ~ 667382 (+)
G265391 NA other downstream 1503716 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1925211 6335618 ~ 6338283 (+)

Expression


Co-expression Network