G264158


Basic Information

Item Value
gene id G264158
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 4469864 ~ 4472975 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU299830
TGGAGTTTTATTTATTAACTTTTATGAACAATATCATTTATTGGAAACATTGGGGGGATCTAGACGATCTATTACATTTTTGTCTGAGTGCTTGTTTCATTGTCTTGCATTGCAACAACAACAAAAAAACATTCCATAGGAATATCAATGATGATTTTCAGTATCATCTGAAAACACTTCCTGGAAAAAAAAAAAAATATATTGTTGTAGTGTCCTTTTTTTTGCCATCTCTTATTTTTACAATGGATGTATTATCCAGGGCTCTCAGATAAAGCTATTTAAAGACAAAGCACTCACATGGGGATTGCAAAACATACATTAAACCAAAATTATTAATGAAATGATTTGCTAAAGACACAGATAAACTAAAATTAAGCTCAAATGTTCAAATTCAAATTCAATTCATTAATCATTCATTATGATTAATATTTCACAAAAAAGAAACCCTACAAATGTAGGTCAGAATGCATATACTTTCAAATAACACAGGCCTGCCTCTGTAGTTCACTGGAGATACATACGTTCTTTACATACATAGCACTGCTATGGTCAAAAATAACAATAAAAAAAAACATTCTGCTTTTGGCAGTGATAAACTAGTATAATAATAATCGTTTGCATGAATATTTCAGCATATTTGACATTCTCATTAAGGCCTGCCTTATGTGATCAGATATGGAATACATAATGCATCTAGCACAAGCTTTGCAATTACAGTTTATATATAAAGCAGAAAGTATTTGTCTGTATTAGGGTATCAGGGATGAACAATATAATCAACACCATATTGTTTATCAGAAATATTAGAGATGCATTTTTTTATACTGTACGTTATAATGTTGTAATGCGTAAATGTATTTTATATATTTATTTTTTAAACAAAATAGTGTATAGCATTAATATTGGCCATATATTGTTTATCAGACATAACACACTGTAATTATCGTTTTATCTGTATTGGCCAGAATCGTAATATTGGTGCATCCCTAACAGTATGTATTTTATGTATAAAATGTTGTCATTATATTCATGCTCTCAAAGCACAGACAAGGAACTGTAATAAAACCTCACAAACTGTTCATCAAACAATAAAAAACACAGTTCTTTCTTCTCTTCAACAAGTCTTGAATGTCTCTTGCATTTCAAAAAGCATCCATCTCTAATTGGACGGCTCTTTTTGCAATTAGCGTACACTGTCCTCATTTAGGACACCATATATGCTGAATCATCTTGTGGGAGAGTTTGGCTCCACTGAACTGACAGCTTCTATATGAATGCAGACTATACAAGTACCCCACTGGTCCTCAGGAAAAAATTCATCTTATTAGCCATATTCATTGGACGGTGGCCCTCTAACCAGATTGTAGTAGCCAGCCAAGGCGCCCAGATCTATATAGAGGGAACCTTTCTTCTTAGAGTGCCCAGAATCCTCAGTGTACAAAGAAGATTCTGCAAATACAAGAGTAAAGGATCTTAAGCATGCAACTAAATGAATTTGACATGACATACTGTATTGTGTGTTGTCTGTTGTGTGCTATACCTTGAGTGCTGTCTGAGAGCTGACTGATCTGTCGCAGCAGTGGATGTGTGCCCTCCTCCAGCGCAGAGTCCAGACTCCAACAGCGCGGCTGGTCTTCCCGAGACGGATGGAGGGCCTCCTCGTTCAATAATTCTGTTGCAGAGCTCCTCCGTGCCGGGACCCTATCGAGGGCGTGTTCCAGGAGCCTGCGCATTGCAGGGCTGCAGCTTTCAGGTATGTCCTCCAGAGGAGGGGCCTGTTTGTGGATCTGCAAACAGAGATTGTGAAAATCAGGGGTGCAGCTATATGGTTGCTCAAACATTTTGACTGCATAAACAGCTCCACTCAAAGAACTATGAAACTGGCACAAAGGCCACGTACACTGAACTAAGCTGTCAGCTGAACTAAGTTGTCACTTCACCTCCTAATATGGAAAAAAATAATAAGCCCAAAGTTGAACTTGTTTTTAGAATGCCGTGTCATGCGTGAGACATGTGGAACATTTTAATAGAAAAGCAGTGCAGTGAAATGCAAAAACGCAATCTGTGTAAACAGGCCTTACATCTTTGGCAATCAAGCACTGATCTTTATTAATTCATCAGTGCAATCAACACAATTTTGGAAGACACTTGTGTTCCATATGCAAATAGAACAATCATAAAGGATTCACTCTCAGGTTTATGGAAGCTTGTTTCTGCCACGGAATAAAAAATAAATGATAATTGCGACTTTTTGTCTCGCAATTCGGACATTTTTTTCTAGCAATTGCGAGTTTATTATTAATTTGTAACTCGCAATTGTGAGTTTATATCTCGCCATTCTGACTTTGTAACTCGCAATTGTGAATTTATATTACGCAATTATAACTATATCTCGCAATAGCGAGATTATATCACGCAATTCTGACTTTGTAACTCGTAATTGTGAGTTTATATCACGCAATTCTGACTATATCTTGCAATTGTGAGTTTATATCACGCAATTCTGACTTTATAACATGCAATTGCGAGTTTATATCACGCAATTCTGACTTTATATCTCACAATTGTGAGTTTATATCACACAATTCTGATTTTATATCTTGCAATTCTGACTTTATATACTCGCAATTGCGAGTTTATATCATGCAACTGTGAGAAAACGGTCAGCTTCCATCTGAAACAAGCTTCCATACAGGTTTAAATGGAGGTTTCACTTCTGAAATTGCTATGAGTACCAAGGTTATTATCGATAATGAAAATCACTAAAACTAATAGGCTACTATCAAAGAAAAAAATATTTTTATTTATGTGTGAAGGTATTCCATTCACGGTCACAGTTAGATGCATATCATTTTCTGTATATTTGAAGCATTTTTTTCCCTTTATTTTTGCCACCCCAATGAAATCACTGTGTCTTACCTGGCCACACCAGGTGAAAATCAATGGTGGCACAGGTGCATTCGCAAGCAGCCTCATGCAAAAAGACGCTGTGCATGGATTTACATTCAGTTACATGAAAAGGAAGTCTAGTATGTGAAAAGGGAACTGAAACCAGTTGGACTTGATACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299830 True 3070 lncRNA 0.36 2 4469864 4472975

Neighbor

gene id symbol gene type direction distance location
CI01000063_04345980_04349791 BAMBI, BAMBIA coding upstream 119628 4345980 ~ 4350236 (+)
CI01000063_04310020_04338879 WACA, WAC coding upstream 130846 4310020 ~ 4339018 (+)
CI01000063_04168036_04180451 NA coding upstream 289348 4166544 ~ 4180516 (+)
CI01000063_04026940_04034428 RAB18B, RAB18, RAB18.S, RAB18A coding upstream 435161 4026940 ~ 4034703 (+)
CI01000063_03991410_04022994 AFAP1 coding upstream 446165 3991301 ~ 4023699 (+)
CI01000063_04479946_04487899 MTPAP coding downstream 6849 4479824 ~ 4487907 (+)
CI01000063_04524187_04533040 NA coding downstream 50479 4523454 ~ 4533366 (+)
CI01000063_04544999_04552162 NA coding downstream 71067 4544042 ~ 4552265 (+)
CI01000063_04568412_04568747 NA coding downstream 95309 4568284 ~ 4569210 (+)
CI01000063_04594405_04629754 SVIL coding downstream 121430 4594405 ~ 4630452 (+)
G264164 NA non-coding upstream 3918 4465389 ~ 4465946 (+)
G264200 NA non-coding upstream 6234 4463249 ~ 4463630 (+)
G264197 NA non-coding upstream 8930 4460705 ~ 4460934 (+)
G264188 NA non-coding upstream 31850 4437657 ~ 4438014 (+)
G264177 NA non-coding upstream 57373 4412153 ~ 4412491 (+)
G264204 NA non-coding downstream 20815 4493790 ~ 4494096 (+)
G264205 NA non-coding downstream 21529 4494504 ~ 4494719 (+)
G264206 NA non-coding downstream 22741 4495716 ~ 4495927 (+)
G264960 NA non-coding downstream 282739 4755714 ~ 4756121 (+)
G264946 NA non-coding downstream 285429 4758404 ~ 4872562 (+)
G262436 NA other upstream 1755347 2713615 ~ 2714517 (+)
G262423 NA other upstream 2226899 2241408 ~ 2242965 (+)
G262194 NA other upstream 3324857 1139352 ~ 1145007 (+)
G262060 NA other upstream 3759310 710110 ~ 710554 (+)
G261984 NA other upstream 3802482 665800 ~ 667382 (+)
G265391 NA other downstream 1440808 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1862303 6335618 ~ 6338283 (+)

Expression


Co-expression Network