XLOC_010366


Basic Information

Item Value
gene id XLOC_010366
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 551682 ~ 552627 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021775
actgaacaaactggtagcAGTGGGAAAGCCTcgcatatgtacctctggctacattcttcacgatctccagaaatgtatactgggCTACATTTTCGGATTGAGCTTCTGTTgaatttattgcagtgcttcttgtctgccGTGAAACACACTTTATATGGTATATcagtcaggcagtgaagatcagtgACTATTTTAAATGATCTTAAACATGGAGATATTGAGATGGCATGACCGTACACTCAAGCAGAGGATGCAGgaacgccattccttttcacgatgccagctgaccgcttacctctgtatgcaCGGCTTAACCTctgctaccagtttgtccagtagctcaccacatacatcagcagacttgagacacagggAGGAGTCAACCTCAAGTCCGGgcaagagcagttccagaaagcaggtaagacaaaaaccatGAAtggaataaatgtaaataacagggtgagaatgtggtgaaatctaaaaaaaacatggtatagagcagacgagggcttttctttttctagattgcttctgaaaacactattggttgggtttagggaaggaggatggttggtcagtcagttaaCAGTGGCCTCTAGTAGATTTGTGTGAGAACAGGAGGCGCGAATGCCACTCGTGACAGAAacttaagatctgaaaaagtatacaaagcgacctctagtggattcacaaaactgcaaagaaacatatctcctgggaagtatttggtgctctccagaaatgtatacaggggaacataatcagaatgagcctgggttgaatattgTGAGGTGCCGTGTGATAGAGGTTGTGTCAAGAAAGATTATTTAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021775 True 831 lncRNA 0.43 2 551682 552627

Neighbor

gene id symbol gene type direction distance location
XLOC_010365 irx4a coding downstream 168018 378766 ~ 383664 (-)
XLOC_010364 NA coding downstream 184538 354846 ~ 367144 (-)
XLOC_010363 NA coding downstream 197902 346263 ~ 353780 (-)
XLOC_010362 NA coding downstream 238129 302755 ~ 313553 (-)
XLOC_010361 LO017917.1 coding downstream 270847 277789 ~ 280835 (-)
XLOC_010367 irx2a coding upstream 3119 555746 ~ 563732 (-)
XLOC_010368 NA coding upstream 651515 1204142 ~ 1218570 (-)
XLOC_010369 NA coding upstream 798344 1350971 ~ 1353006 (-)
XLOC_010370 sim1a coding upstream 912997 1465624 ~ 1503023 (-)
XLOC_010371 ascc3 coding upstream 951653 1504280 ~ 1757521 (-)
XLOC_010626 CR392024.2 misc upstream 20342485 20895112 ~ 20895175 (-)
XLOC_010359 NA non-coding downstream 312409 227820 ~ 239273 (-)
XLOC_010358 NA non-coding downstream 345423 204125 ~ 206259 (-)
XLOC_010372 NA non-coding upstream 1395398 1948025 ~ 1949069 (-)
XLOC_010378 CU929110.1 non-coding upstream 2183049 2735676 ~ 2735799 (-)
XLOC_010380 NA non-coding upstream 2257090 2809717 ~ 2812008 (-)

Expression


Co-expression Network