Gene
RNA
| Item | Value |
|---|---|
| gene id | G264935 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000063 |
| NCBI id | null |
| chromosome length | 7808773 |
| location | 4737134 ~ 4737382 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| rapamycin-insensitive companion of mTOR |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU300653 | True | 249 | lncRNA | 0.40 | 1 | 4737134 | 4737382 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000063_04667829_04669237 | CHAC2 | coding | downstream | 67897 | 4667166 ~ 4669237 (-) |
| CI01000063_04471188_04479927 | MAP3K8 | coding | downstream | 257207 | 4469900 ~ 4479927 (-) |
| CI01000063_04183070_04264881 | MPP7A, MPP7 | coding | downstream | 472253 | 4182580 ~ 4264881 (-) |
| CI01000063_04101695_04159421 | ARMC4 | coding | downstream | 577713 | 4101402 ~ 4159421 (-) |
| CI01000063_04056574_04087071 | MKXA, MKX | coding | downstream | 648519 | 4056196 ~ 4088615 (-) |
| CI01000063_04834309_04848552 | NA | coding | upstream | 96665 | 4834047 ~ 4848720 (-) |
| CI01000063_05056169_05057789 | FOXN2B, FOXN2 | coding | upstream | 318787 | 5056169 ~ 5057855 (-) |
| CI01000063_05070661_05081280 | FBXO11A, FBXO11B, FBXO11 | coding | upstream | 333041 | 5070423 ~ 5081280 (-) |
| CI01000063_05085075_05095432 | MSH2 | coding | upstream | 346886 | 5084268 ~ 5095527 (-) |
| CI01000063_05160162_05161742 | SOCS5A | coding | upstream | 421185 | 5158567 ~ 5163276 (-) |
| G264836 | NA | non-coding | downstream | 86369 | 4649247 ~ 4650765 (-) |
| G264826 | NA | non-coding | downstream | 102920 | 4632698 ~ 4634214 (-) |
| G264843 | NA | non-coding | downstream | 152041 | 4583173 ~ 4585093 (-) |
| G264868 | NA | non-coding | downstream | 273403 | 4463127 ~ 4463731 (-) |
| G264866 | NA | non-coding | downstream | 276365 | 4460536 ~ 4460769 (-) |
| G264942 | NA | non-coding | upstream | 5936 | 4743318 ~ 4743555 (-) |
| G265517 | NA | non-coding | upstream | 84744 | 4822126 ~ 4822762 (-) |
| G265504 | NA | non-coding | upstream | 159561 | 4896943 ~ 4916836 (-) |
| G265610 | NA | non-coding | upstream | 219209 | 4956591 ~ 4957595 (-) |
| G265574 | NA | non-coding | upstream | 239029 | 4976411 ~ 4990600 (-) |
| CI01000063_02725759_02726399 | NA | other | downstream | 2010599 | 2725759 ~ 2726535 (-) |
| CI01000063_02326799_02327290 | CBY1 | other | downstream | 2409415 | 2326741 ~ 2327309 (-) |
| CI01000063_02177769_02178239 | NA | other | downstream | 2558798 | 2177747 ~ 2178395 (-) |
| CI01000063_01669384_01670016 | HBAE1 | other | downstream | 3067058 | 1669317 ~ 1672019 (-) |
| G265567 | NA | other | upstream | 425112 | 5183279 ~ 5183287 (-) |
| CI01000063_05189361_05189645 | CRIPT | other | upstream | 451021 | 5188403 ~ 5189645 (-) |
| CI01000063_05616519_05617045 | NA | other | upstream | 809319 | 5615806 ~ 5617112 (-) |
| G265976 | NA | other | upstream | 1550776 | 6283058 ~ 6290946 (-) |
| G266797 | NA | other | upstream | 2552113 | 7289495 ~ 7290224 (-) |
