G265504


Basic Information

Item Value
gene id G265504
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 4896943 ~ 4916836 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU301343
GTTTACTAATAAGACTGATTCACATTTTTCTCTTCCCACCGGAAAACAAACACTTCCTGATGGTCTCTGCAGGGACCAGGAAGCAGCAAAAAGACGATGGAAAGAAAATAAGAGGCAGTCATTGGCTGTCAAGCTCGGGGCTGAGGAGGGATTTGAGGAGAGGCTCTCTGAGGAAATGATCTTTGCGAGGGTTATTGGAAACGGCGTGAGCTGGAGTGTGATCTGTGAGTGAGAAACTTAATCGCCTCTCCTCTCATTCCAGTCAGCTCCATTTCTCACATTCCTAGAAAATGGCTGCCAGGGAGCCTGAAGGCTCCTGCAGCCCACAGGCAAAAACTAGCCGTACCTGACAGCTCGCTCGCACTTTGGAAACACCACTCAAAGCCCTGCTGGCCGCAACACAGAGGCTTCGTAACCACAATGTTTTACACTTCTGAGAGCATACACACGCACGCACGCACATACATACAAATGAACAGTGCACATACAGAGGGCGCTTTGGTTCAGTATCATAGAGGCAGAGAGAAGAGGAAGAGAGGGGAAGAGTCACTTACTGGTAGTACAGTTTATCCTGATACAGTCTAGATTGACAGTGAGTCGGACACGCCCTCCGTCCAGCTCCAGCCTCAGAGTGTCAGCTGAGTTCCGGGAGGTGGTTGCCATGAGAACACCATAGGCACGCTGGGAACGGAAGCGCAGCGACACATCTTCTGCCTCTGTGTGCATCACTACTGGCAACTGGATCTTCATGAACTTACTGCCATCATAACTGAGGATGGTGGCATCTCTCTCACAGGAGCGACCTAGATAGCCCGTCCCTGAGCAGTCACACACATATCGGTTCCAGCCCTCTCTGCAGGTGCCGCTATTAAGGCAGGGGTTGCTTAGACACTGTTTGGGAGGTTCCTTAGAACAGGATGGCTTCACCCCGACCGCTCTCTGAGCCTCCGCTATCCGCCGGATGTCCTTGCTCTGGCCGTCCATGAACAGATCTCGCACACAGCCCACATAGCCGTAGTTAAGGAGAGCGGTCCACACCTCCGTGGGGAAGATCAGACCGGCGCGGTCCTCTGGCAGGCCGCCCAGGTAGAGTATGTCGTCCAAGTCCAGGATCTCACTCTCACCGGGAGCGTTGTAGGGAGTACGGATCGAGTTGACGGAAATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU301343 True 1166 lncRNA 0.53 3 4896943 4916836

Neighbor

gene id symbol gene type direction distance location
CI01000063_04834309_04848552 NA coding downstream 48223 4834047 ~ 4848720 (-)
CI01000063_04667829_04669237 CHAC2 coding downstream 227706 4667166 ~ 4669237 (-)
CI01000063_04471188_04479927 MAP3K8 coding downstream 417016 4469900 ~ 4479927 (-)
CI01000063_04183070_04264881 MPP7A, MPP7 coding downstream 632062 4182580 ~ 4264881 (-)
CI01000063_04101695_04159421 ARMC4 coding downstream 737522 4101402 ~ 4159421 (-)
CI01000063_05056169_05057789 FOXN2B, FOXN2 coding upstream 139333 5056169 ~ 5057855 (-)
CI01000063_05070661_05081280 FBXO11A, FBXO11B, FBXO11 coding upstream 153587 5070423 ~ 5081280 (-)
CI01000063_05085075_05095432 MSH2 coding upstream 167432 5084268 ~ 5095527 (-)
CI01000063_05160162_05161742 SOCS5A coding upstream 241731 5158567 ~ 5163276 (-)
CI01000063_05189361_05189645 CRIPT coding upstream 271659 5188403 ~ 5189645 (-)
G265517 NA non-coding downstream 74181 4822126 ~ 4822762 (-)
G264942 NA non-coding downstream 153388 4743318 ~ 4743555 (-)
G264935 NA non-coding downstream 159561 4737134 ~ 4737382 (-)
G264836 NA non-coding downstream 246178 4649247 ~ 4650765 (-)
G264826 NA non-coding downstream 262729 4632698 ~ 4634214 (-)
G265610 NA non-coding upstream 39755 4956591 ~ 4957595 (-)
G265574 NA non-coding upstream 59575 4976411 ~ 4990600 (-)
G265620 NA non-coding upstream 109431 5026267 ~ 5026848 (-)
G265625 NA non-coding upstream 183520 5100356 ~ 5100986 (-)
G265564 NA non-coding upstream 192528 5109364 ~ 5113104 (-)
CI01000063_02725759_02726399 NA other downstream 2170408 2725759 ~ 2726535 (-)
CI01000063_02326799_02327290 CBY1 other downstream 2569224 2326741 ~ 2327309 (-)
CI01000063_02177769_02178239 NA other downstream 2718607 2177747 ~ 2178395 (-)
CI01000063_01669384_01670016 HBAE1 other downstream 3226867 1669317 ~ 1672019 (-)
G265567 NA other upstream 245658 5183279 ~ 5183287 (-)
CI01000063_05616519_05617045 NA other upstream 629865 5615806 ~ 5617112 (-)
G265976 NA other upstream 1371322 6283058 ~ 6290946 (-)
G266797 NA other upstream 2372659 7289495 ~ 7290224 (-)

Expression


Co-expression Network