G265040


Basic Information

Item Value
gene id G265040
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5135891 ~ 5136247 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300795
GGAAGCCATGATCGATGCTCTAGTGCATTACTGATGATTTGCACTCAGCCAGTTAGTGGTTTTTGGACACATCCATTAATGAGCCACGTCTGTCCTCACCTCAACCACATACAAGCACAATGAGACTGGACATGGCTCTTAGCTTGATAATGTGTACACCCACAAACATACACATGCACAAATACACTTAATGCGCATACAAACTCCTAAAAGTGGGCATCGAATAAAAGCATCTTCACTAAGAGCTGTTTAGATGCAGAGAGAAGCGGGATAACTTAATTTGGTGTGATTCCACCAGAAGAATTACAGAGAAGAGCTGGGCAGGAATGAATTGTGTAAGTATTGCTACCCCTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300795 True 357 lncRNA 0.43 1 5135891 5136247

Neighbor

gene id symbol gene type direction distance location
CI01000063_05108936_05112439 CALM, CALML6, CALM2, CALM3, CALM1 coding upstream 22822 5108936 ~ 5113069 (+)
CI01000063_05083449_05083858 NA coding upstream 51681 5083449 ~ 5084210 (+)
CI01000063_05034462_05041925 FSHR coding upstream 92572 5034462 ~ 5043319 (+)
CI01000063_04927483_04988999 NRXN1A, NRXN1 coding upstream 146892 4927483 ~ 4988999 (+)
CI01000063_04896882_04899387 NA coding upstream 235900 4895763 ~ 4899991 (+)
CI01000063_05183819_05187667 GCH2, GCH1 coding downstream 47372 5183619 ~ 5188349 (+)
CI01000063_05191319_05197432 PIGF coding downstream 55072 5191319 ~ 5197560 (+)
CI01000063_05223875_05227171 NA coding downstream 87628 5223875 ~ 5227171 (+)
CI01000063_05271158_05276999 NA coding downstream 134911 5271158 ~ 5277105 (+)
CI01000063_05281800_05302429 NA coding downstream 144408 5280655 ~ 5302499 (+)
G264945 NA non-coding upstream 49999 5084880 ~ 5085892 (+)
G264948 NA non-coding upstream 61766 5070451 ~ 5074125 (+)
G265005 NA non-coding upstream 108512 5027145 ~ 5027379 (+)
G265004 NA non-coding upstream 111489 5024122 ~ 5024402 (+)
G264997 NA non-coding upstream 121305 5014349 ~ 5014586 (+)
G265041 NA non-coding downstream 94 5136341 ~ 5136689 (+)
G265042 NA non-coding downstream 1356 5137603 ~ 5137907 (+)
G265049 NA non-coding downstream 9251 5145498 ~ 5145762 (+)
G265054 NA non-coding downstream 14684 5150931 ~ 5151217 (+)
G265055 NA non-coding downstream 15797 5152044 ~ 5152315 (+)
G262436 NA other upstream 2421374 2713615 ~ 2714517 (+)
G262423 NA other upstream 2892926 2241408 ~ 2242965 (+)
G262194 NA other upstream 3990884 1139352 ~ 1145007 (+)
G262060 NA other upstream 4425337 710110 ~ 710554 (+)
G261984 NA other upstream 4468509 665800 ~ 667382 (+)
G265391 NA other downstream 777536 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1199031 6335618 ~ 6338283 (+)

Expression


Co-expression Network