G265049


Basic Information

Item Value
gene id G265049
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5145498 ~ 5145762 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300809
AACAGTAAAAGTTCCAGGTCTATTGTAGTTATTAAGTAATCAATTTAAACTATTTGCAAATAATAGTTTTTTAAAAATAGATTCACTTTTATTTGTATGTCTGATATGTCAAAAACGCAAAATGTTTCTTGTCTCGTCACATTCAGTTATGAATTACATTAATCATATCATATTAATCAAATAATAACATGTTTTCAATTCAAAACGGCAAAATTTCATAAAAATGTTGAGTAGTTTAAATCACTAAATATTACTGTCTGTCGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300809 True 265 lncRNA 0.25 1 5145498 5145762

Neighbor

gene id symbol gene type direction distance location
CI01000063_05108936_05112439 CALM, CALML6, CALM2, CALM3, CALM1 coding upstream 32429 5108936 ~ 5113069 (+)
CI01000063_05083449_05083858 NA coding upstream 61288 5083449 ~ 5084210 (+)
CI01000063_05034462_05041925 FSHR coding upstream 102179 5034462 ~ 5043319 (+)
CI01000063_04927483_04988999 NRXN1A, NRXN1 coding upstream 156499 4927483 ~ 4988999 (+)
CI01000063_04896882_04899387 NA coding upstream 245507 4895763 ~ 4899991 (+)
CI01000063_05183819_05187667 GCH2, GCH1 coding downstream 37857 5183619 ~ 5188349 (+)
CI01000063_05191319_05197432 PIGF coding downstream 45557 5191319 ~ 5197560 (+)
CI01000063_05223875_05227171 NA coding downstream 78113 5223875 ~ 5227171 (+)
CI01000063_05271158_05276999 NA coding downstream 125396 5271158 ~ 5277105 (+)
CI01000063_05281800_05302429 NA coding downstream 134893 5280655 ~ 5302499 (+)
G265042 NA non-coding upstream 7591 5137603 ~ 5137907 (+)
G265041 NA non-coding upstream 8809 5136341 ~ 5136689 (+)
G265040 NA non-coding upstream 9251 5135891 ~ 5136247 (+)
G264945 NA non-coding upstream 59606 5084880 ~ 5085892 (+)
G264948 NA non-coding upstream 71373 5070451 ~ 5074125 (+)
G265054 NA non-coding downstream 5169 5150931 ~ 5151217 (+)
G265055 NA non-coding downstream 6282 5152044 ~ 5152315 (+)
G265056 NA non-coding downstream 6651 5152413 ~ 5152793 (+)
G265057 NA non-coding downstream 7390 5153152 ~ 5153459 (+)
G265058 NA non-coding downstream 8073 5153835 ~ 5154174 (+)
G262436 NA other upstream 2430981 2713615 ~ 2714517 (+)
G262423 NA other upstream 2902533 2241408 ~ 2242965 (+)
G262194 NA other upstream 4000491 1139352 ~ 1145007 (+)
G262060 NA other upstream 4434944 710110 ~ 710554 (+)
G261984 NA other upstream 4478116 665800 ~ 667382 (+)
G265391 NA other downstream 768021 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1189516 6335618 ~ 6338283 (+)

Expression


Co-expression Network