G265056


Basic Information

Item Value
gene id G265056
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5152413 ~ 5152793 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300816
TAACACTCTAAATGTTTTGGTCCACATCAACCTGTCACATATAGGCTACCAATAAACAACATAAGGACAGAAGATGGGAAAAAGGTCAAAGAGTTTACTTTAATAGTAAAGATGGCATCAGAACAACATGCAGCCCTTACCTCCTAATTGCGACGGAAAAGTTGTGTCTGTCTTTTCCTATTAAACTGTACCGACACCTGCTGGACACAAAAGGAAACACACAAAATAATGAAGACTTCGAAACCACACAACTTAAACTTTTTTTTTTTTTTTTTATATGAAACAGGACAAAACATCAAAACATTAAGGTAATACAGAAACTTTAATATCGTTCCAAACCCGTTCGACTCGCAACTGAATCGTCGAAATAATGGACACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300816 True 381 lncRNA 0.36 1 5152413 5152793

Neighbor

gene id symbol gene type direction distance location
CI01000063_05108936_05112439 CALM, CALML6, CALM2, CALM3, CALM1 coding upstream 39344 5108936 ~ 5113069 (+)
CI01000063_05083449_05083858 NA coding upstream 68203 5083449 ~ 5084210 (+)
CI01000063_05034462_05041925 FSHR coding upstream 109094 5034462 ~ 5043319 (+)
CI01000063_04927483_04988999 NRXN1A, NRXN1 coding upstream 163414 4927483 ~ 4988999 (+)
CI01000063_04896882_04899387 NA coding upstream 252422 4895763 ~ 4899991 (+)
CI01000063_05183819_05187667 GCH2, GCH1 coding downstream 30826 5183619 ~ 5188349 (+)
CI01000063_05191319_05197432 PIGF coding downstream 38526 5191319 ~ 5197560 (+)
CI01000063_05223875_05227171 NA coding downstream 71082 5223875 ~ 5227171 (+)
CI01000063_05271158_05276999 NA coding downstream 118365 5271158 ~ 5277105 (+)
CI01000063_05281800_05302429 NA coding downstream 127862 5280655 ~ 5302499 (+)
G265055 NA non-coding upstream 98 5152044 ~ 5152315 (+)
G265054 NA non-coding upstream 1196 5150931 ~ 5151217 (+)
G265049 NA non-coding upstream 6651 5145498 ~ 5145762 (+)
G265042 NA non-coding upstream 14506 5137603 ~ 5137907 (+)
G265041 NA non-coding upstream 15724 5136341 ~ 5136689 (+)
G265057 NA non-coding downstream 359 5153152 ~ 5153459 (+)
G265058 NA non-coding downstream 1042 5153835 ~ 5154174 (+)
G265059 NA non-coding downstream 1398 5154191 ~ 5154717 (+)
G265046 NA non-coding downstream 2336 5155129 ~ 5159416 (+)
G265096 NA non-coding downstream 155152 5307945 ~ 5308294 (+)
G262436 NA other upstream 2437896 2713615 ~ 2714517 (+)
G262423 NA other upstream 2909448 2241408 ~ 2242965 (+)
G262194 NA other upstream 4007406 1139352 ~ 1145007 (+)
G262060 NA other upstream 4441859 710110 ~ 710554 (+)
G261984 NA other upstream 4485031 665800 ~ 667382 (+)
G265391 NA other downstream 760990 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1182485 6335618 ~ 6338283 (+)

Expression


Co-expression Network