G265059


Basic Information

Item Value
gene id G265059
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5154191 ~ 5154717 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300819
AAAAAAGGTTAGCTATTTCTTGTTTTACCTTGTTTAAGCTGGATGACAAGTCCAGATGAACCAGATGTCACTTGAATACAGTTATTCCATTGTGGCTAACTCAAGACCATGAGGACCTTACTGTGAACTTCAATCTGTTGCGAGGCCCAGATGTCTGGGTATATTTATAGCTCAGTACAGTGTCTTTAAGGCAGGCTCCAACCATACTGAACTCCTACTGGTCCCTACACATTTACACTGACCTTAAGTGTCCCGAACAGGGGACTGAAAAACATGGAACGGATAGCAGGTTAATGCAGAATTAGTATGAAGTACATTACATAATACTGGTGTGAAGTGACTAGTGCAGTACATTGAGAGATTACATCATATTTTTCTCACACCTACCTCCTTTCTTCCTCAATCAAAGCAGATTTTTAGTTATTCAGAGGTCTACTGCAGATAAACTGCACCCATTACCATTTTTACCTGACTTCAACAGAACACTGCAGAGACGAATGACAACCTAACTCTTCCTTCAGTTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300819 True 527 lncRNA 0.41 1 5154191 5154717

Neighbor

gene id symbol gene type direction distance location
CI01000063_05108936_05112439 CALM, CALML6, CALM2, CALM3, CALM1 coding upstream 41122 5108936 ~ 5113069 (+)
CI01000063_05083449_05083858 NA coding upstream 69981 5083449 ~ 5084210 (+)
CI01000063_05034462_05041925 FSHR coding upstream 110872 5034462 ~ 5043319 (+)
CI01000063_04927483_04988999 NRXN1A, NRXN1 coding upstream 165192 4927483 ~ 4988999 (+)
CI01000063_04896882_04899387 NA coding upstream 254200 4895763 ~ 4899991 (+)
CI01000063_05183819_05187667 GCH2, GCH1 coding downstream 28902 5183619 ~ 5188349 (+)
CI01000063_05191319_05197432 PIGF coding downstream 36602 5191319 ~ 5197560 (+)
CI01000063_05223875_05227171 NA coding downstream 69158 5223875 ~ 5227171 (+)
CI01000063_05271158_05276999 NA coding downstream 116441 5271158 ~ 5277105 (+)
CI01000063_05281800_05302429 NA coding downstream 125938 5280655 ~ 5302499 (+)
G265058 NA non-coding upstream 17 5153835 ~ 5154174 (+)
G265057 NA non-coding upstream 732 5153152 ~ 5153459 (+)
G265056 NA non-coding upstream 1398 5152413 ~ 5152793 (+)
G265055 NA non-coding upstream 1876 5152044 ~ 5152315 (+)
G265054 NA non-coding upstream 2974 5150931 ~ 5151217 (+)
G265046 NA non-coding downstream 412 5155129 ~ 5159416 (+)
G265096 NA non-coding downstream 153228 5307945 ~ 5308294 (+)
G265104 NA non-coding downstream 159512 5314229 ~ 5314511 (+)
G265109 NA non-coding downstream 164915 5319632 ~ 5319863 (+)
G265114 NA non-coding downstream 171286 5326003 ~ 5326336 (+)
G262436 NA other upstream 2439674 2713615 ~ 2714517 (+)
G262423 NA other upstream 2911226 2241408 ~ 2242965 (+)
G262194 NA other upstream 4009184 1139352 ~ 1145007 (+)
G262060 NA other upstream 4443637 710110 ~ 710554 (+)
G261984 NA other upstream 4486809 665800 ~ 667382 (+)
G265391 NA other downstream 759066 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1180561 6335618 ~ 6338283 (+)

Expression


Co-expression Network