G265096


Basic Information

Item Value
gene id G265096
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5307945 ~ 5308294 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300862
CAATCGGTTAGCGCGCGGTACTTATACAGCAGTACAAAGCAGAGCAATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCAGAGTTTTGCACGATTAAAAAATAGGCTGAGTCTCTGCTCAACGCGTAATAACGATGGTGGACAGTTTCACATGGTCACTTATCTAAGCATATGTCGAAAAAAGATCTCGTGTGCCATAACTCGCAGTGCTCTGTTATTGAGCAGTAAATGTGTAGACATTCAAAGGCAGTGCGTTGTGTGTGAACAAACAAGACGATTAGGAAGTAGGCTACAATGTATTTGGCGTTAATGGCAGGAAGAAGCCTCTAAGGGGCAGTATTGACTTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300862 True 350 lncRNA 0.45 1 5307945 5308294

Neighbor

gene id symbol gene type direction distance location
CI01000063_05281800_05302429 NA coding upstream 5446 5280655 ~ 5302499 (+)
CI01000063_05271158_05276999 NA coding upstream 30840 5271158 ~ 5277105 (+)
CI01000063_05223875_05227171 NA coding upstream 80774 5223875 ~ 5227171 (+)
CI01000063_05191319_05197432 PIGF coding upstream 110385 5191319 ~ 5197560 (+)
CI01000063_05183819_05187667 GCH2, GCH1 coding upstream 119596 5183619 ~ 5188349 (+)
CI01000063_05400578_05406105 PPM1BB, PPM1B coding downstream 92284 5400578 ~ 5406277 (+)
CI01000063_05466326_05468126 SIX3, SIX3A, SIX3B, SIX3.L coding downstream 157758 5466052 ~ 5469282 (+)
CI01000063_05490285_05556254 PRKCEA, PRKCE, PRKCEB coding downstream 181991 5490285 ~ 5556462 (+)
CI01000063_05563124_05584474 NA coding downstream 254830 5563124 ~ 5585104 (+)
CI01000063_05597755_05613489 GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S coding downstream 289030 5597324 ~ 5614654 (+)
G265046 NA non-coding upstream 148529 5155129 ~ 5159416 (+)
G265059 NA non-coding upstream 153228 5154191 ~ 5154717 (+)
G265058 NA non-coding upstream 153771 5153835 ~ 5154174 (+)
G265057 NA non-coding upstream 154486 5153152 ~ 5153459 (+)
G265056 NA non-coding upstream 155152 5152413 ~ 5152793 (+)
G265104 NA non-coding downstream 5935 5314229 ~ 5314511 (+)
G265109 NA non-coding downstream 11338 5319632 ~ 5319863 (+)
G265114 NA non-coding downstream 17709 5326003 ~ 5326336 (+)
G265126 NA non-coding downstream 33920 5342214 ~ 5342446 (+)
G265132 NA non-coding downstream 41467 5349761 ~ 5349978 (+)
G262436 NA other upstream 2593428 2713615 ~ 2714517 (+)
G262423 NA other upstream 3064980 2241408 ~ 2242965 (+)
G262194 NA other upstream 4162938 1139352 ~ 1145007 (+)
G262060 NA other upstream 4597391 710110 ~ 710554 (+)
G261984 NA other upstream 4640563 665800 ~ 667382 (+)
G265391 NA other downstream 605489 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 1026984 6335618 ~ 6338283 (+)

Expression


Co-expression Network