G265094


Basic Information

Item Value
gene id G265094
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5360934 ~ 5367266 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300860
GGCCGATGACGCATATGATTTTCGCTTCTCCCCAAAAAAATATCCTGTGTGTACCAGAGTGGGAGAAGCTGTCGCCCCGTTGCTCCACTGATTATTTCCCTTAATTACAGCTGCACTGGAGCTGCATGAACTCCACGAACCTGATGATCCCAATGATCCAGTGAGCAGGGAAGATGGAAGAACGGAAGAACATCTTCTCCTACGCTGTTGATGTAGTGAACGCAGTGCAGCTCTTCCGTGTTTACGTCTGAACGACGGCTCAGTATTGGCCGACGCTGTACATTGGAAAATAATCTGAAGTGTTTCGAAGATGAATGAAGTTTGGTACGGTTTGGTACAACATGAAGAGTCTCAGCGGATTAATCGGGTTGCTGAACTGAGCATCAGCAGCTGCTCCTTATCCTTATCATCGCCGTAACAACCGGCCAGCCGTCGCCTCCCACAGAATCCTGCAGAGACCTGAATTAATACTCGGTATAATTCCACACAATCCCAAGAAAAATCTCGTCCTGCTGCCAGGCCACTTGACCCGTGTGTTCCAGTGGGCTCTGGATGGCACCAGCAATCTCTGTAATCATTCAGTAAGCCTCTGCGCTGCTCAGTTCAGCTGCTTCTTCAGAGCATTTAAAAAAAGAGCAGAGCTGGGGTGCACTGTGTGTCAAACATGTATGTTTATCCTGTCCAGTAATTAAAATGGGGTTGCTTAACATGGCTCCCTTATGTAAATACATGAATAGACATGCAAACAAACACACATATGGACCATGATCACCCCACACAAAATGAGTTATGGATACCATGTCTTTCAAAACCAGTTGAAGAATTAAACTAATTCATTAAGATGAGTGTGTTTTCATGTCAAACAATTCATGTCAAAGAAAGTGTAAGGAAGGAAAATATCTTTTCATTTATTTGCATTTATTAAAAGACAATAATATAGTTTTGAATAAACAGAAAATGTTATATTATTTAATAAAAAAAATGATATTTCTGCTGTTTATGATATATTAGTATTATTGTTGTTTTTAAATATTATTTAAAATATATTATTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300860 True 1055 lncRNA 0.40 6 5360934 5367266

Neighbor

gene id symbol gene type direction distance location
CI01000063_05281800_05302429 NA coding upstream 58435 5280655 ~ 5302499 (+)
CI01000063_05271158_05276999 NA coding upstream 83829 5271158 ~ 5277105 (+)
CI01000063_05223875_05227171 NA coding upstream 133763 5223875 ~ 5227171 (+)
CI01000063_05191319_05197432 PIGF coding upstream 163374 5191319 ~ 5197560 (+)
CI01000063_05183819_05187667 GCH2, GCH1 coding upstream 172585 5183619 ~ 5188349 (+)
CI01000063_05400578_05406105 PPM1BB, PPM1B coding downstream 33312 5400578 ~ 5406277 (+)
CI01000063_05466326_05468126 SIX3, SIX3A, SIX3B, SIX3.L coding downstream 98786 5466052 ~ 5469282 (+)
CI01000063_05490285_05556254 PRKCEA, PRKCE, PRKCEB coding downstream 123019 5490285 ~ 5556462 (+)
CI01000063_05563124_05584474 NA coding downstream 195858 5563124 ~ 5585104 (+)
CI01000063_05597755_05613489 GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S coding downstream 230058 5597324 ~ 5614654 (+)
G265133 NA non-coding upstream 10021 5350506 ~ 5350913 (+)
G265132 NA non-coding upstream 10956 5349761 ~ 5349978 (+)
G265126 NA non-coding upstream 18488 5342214 ~ 5342446 (+)
G265114 NA non-coding upstream 34598 5326003 ~ 5326336 (+)
G265109 NA non-coding upstream 41071 5319632 ~ 5319863 (+)
G265141 NA non-coding downstream 14925 5382191 ~ 5382479 (+)
G265142 NA non-coding downstream 15441 5382707 ~ 5382924 (+)
G265173 NA non-coding downstream 68133 5435399 ~ 5435640 (+)
G265198 NA non-coding downstream 123311 5490577 ~ 5490806 (+)
G262436 NA other upstream 2646417 2713615 ~ 2714517 (+)
G262423 NA other upstream 3117969 2241408 ~ 2242965 (+)
G262194 NA other upstream 4215927 1139352 ~ 1145007 (+)
G262060 NA other upstream 4650380 710110 ~ 710554 (+)
G261984 NA other upstream 4693552 665800 ~ 667382 (+)
G265391 NA other downstream 546517 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 968012 6335618 ~ 6338283 (+)

Expression


Co-expression Network