G265173


Basic Information

Item Value
gene id G265173
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5435399 ~ 5435640 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300942
ATTAAATGAGGCACTGACACTGTTTTTCATGTTTGATACTGTAAAGCTGCTTACTTTTAAGCAATCTATTGAATAAAATGCCATATATAAACATGACGTGACTTTACTGGAGTGCTAATTTGCAGAGCTCATGCTAACATACCCATGTTGTTATGATCAGATGCTTTTCTTATGCTTTCTTTATAAAATGCTTGCTGTTTTCTCGTTTTTGTTGTTTATTTTGTTACTAAGATGAAAGCGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300942 True 242 lncRNA 0.32 1 5435399 5435640

Neighbor

gene id symbol gene type direction distance location
CI01000063_05400578_05406105 PPM1BB, PPM1B coding upstream 29122 5400578 ~ 5406277 (+)
CI01000063_05281800_05302429 NA coding upstream 132900 5280655 ~ 5302499 (+)
CI01000063_05271158_05276999 NA coding upstream 158294 5271158 ~ 5277105 (+)
CI01000063_05223875_05227171 NA coding upstream 208228 5223875 ~ 5227171 (+)
CI01000063_05191319_05197432 PIGF coding upstream 237839 5191319 ~ 5197560 (+)
CI01000063_05466326_05468126 SIX3, SIX3A, SIX3B, SIX3.L coding downstream 30412 5466052 ~ 5469282 (+)
CI01000063_05490285_05556254 PRKCEA, PRKCE, PRKCEB coding downstream 54645 5490285 ~ 5556462 (+)
CI01000063_05563124_05584474 NA coding downstream 127484 5563124 ~ 5585104 (+)
CI01000063_05597755_05613489 GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S coding downstream 161684 5597324 ~ 5614654 (+)
CI01000063_05639341_05650366 NA coding downstream 203650 5639290 ~ 5650682 (+)
G265142 NA non-coding upstream 52475 5382707 ~ 5382924 (+)
G265141 NA non-coding upstream 52920 5382191 ~ 5382479 (+)
G265094 NA non-coding upstream 68133 5360934 ~ 5367266 (+)
G265133 NA non-coding upstream 84486 5350506 ~ 5350913 (+)
G265132 NA non-coding upstream 85421 5349761 ~ 5349978 (+)
G265198 NA non-coding downstream 54937 5490577 ~ 5490806 (+)
G265156 NA non-coding downstream 233262 5668902 ~ 5689574 (+)
G265153 NA non-coding downstream 254576 5690216 ~ 5712916 (+)
G265246 NA non-coding downstream 269453 5705093 ~ 5706882 (+)
G262436 NA other upstream 2720882 2713615 ~ 2714517 (+)
G262423 NA other upstream 3192434 2241408 ~ 2242965 (+)
G262194 NA other upstream 4290392 1139352 ~ 1145007 (+)
G262060 NA other upstream 4724845 710110 ~ 710554 (+)
G261984 NA other upstream 4768017 665800 ~ 667382 (+)
G265391 NA other downstream 478143 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 899638 6335618 ~ 6338283 (+)

Expression


Co-expression Network