Gene
RNA
| Item | Value |
|---|---|
| gene id | G265793 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000063 |
| NCBI id | null |
| chromosome length | 7808773 |
| location | 5559531 ~ 5566376 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU301687 | True | 627 | lncRNA | 0.45 | 2 | 5559531 | 5566376 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000063_05473346_05474995 | SIX2B, SIX2A, SIX2 | coding | downstream | 83774 | 5473338 ~ 5475757 (-) |
| CI01000063_05353701_05355458 | ZFP36L2 | coding | downstream | 203247 | 5352758 ~ 5356284 (-) |
| CI01000063_05304502_05306803 | HCAR1-4 | coding | downstream | 252728 | 5304439 ~ 5306803 (-) |
| CI01000063_05257128_05262520 | KCNG3 | coding | downstream | 296200 | 5256958 ~ 5263331 (-) |
| CI01000063_05252331_05253850 | COX7A3 | coding | downstream | 305681 | 5250005 ~ 5253940 (-) |
| CI01000063_05616519_05617045 | NA | coding | upstream | 49430 | 5615806 ~ 5617112 (-) |
| CI01000063_05627849_05635031 | SNCGB, SNCG, SNCA | coding | upstream | 61382 | 5627758 ~ 5635031 (-) |
| CI01000063_05652987_05657351 | BMPR1AB, BMPR1A, BMPR1AA | coding | upstream | 85900 | 5652276 ~ 5657351 (-) |
| CI01000063_05689441_05689773 | NA | coding | upstream | 121927 | 5688303 ~ 5689881 (-) |
| CI01000063_05690755_05712496 | LDB3B, LDB3 | coding | upstream | 123888 | 5690264 ~ 5712923 (-) |
| G265742 | NA | non-coding | downstream | 110153 | 5449092 ~ 5449378 (-) |
| G265733 | NA | non-coding | downstream | 144863 | 5414430 ~ 5414668 (-) |
| G265732 | NA | non-coding | downstream | 145664 | 5413427 ~ 5413867 (-) |
| G265714 | NA | non-coding | downstream | 182555 | 5376744 ~ 5376976 (-) |
| G265709 | NA | non-coding | downstream | 194133 | 5360758 ~ 5365398 (-) |
| CI01000063_05950749_05954473 | NA | non-coding | upstream | 331996 | 5949613 ~ 5954558 (-) |
| G265890 | NA | non-coding | upstream | 356141 | 5922517 ~ 5926035 (-) |
| G265889 | NA | non-coding | upstream | 362366 | 5928742 ~ 5931804 (-) |
| G265802 | NA | non-coding | upstream | 572315 | 6138691 ~ 6151199 (-) |
| G265789 | NA | non-coding | upstream | 609301 | 6175677 ~ 6177315 (-) |
| G265567 | NA | other | downstream | 305591 | 5183279 ~ 5183287 (-) |
| CI01000063_05189361_05189645 | CRIPT | other | downstream | 368914 | 5188403 ~ 5189645 (-) |
| CI01000063_02725759_02726399 | NA | other | downstream | 2832996 | 2725759 ~ 2726535 (-) |
| CI01000063_02326799_02327290 | CBY1 | other | downstream | 3231812 | 2326741 ~ 2327309 (-) |
| CI01000063_02177769_02178239 | NA | other | downstream | 3381195 | 2177747 ~ 2178395 (-) |
| G265976 | NA | other | upstream | 721782 | 6283058 ~ 6290946 (-) |
| G266797 | NA | other | upstream | 1723119 | 7289495 ~ 7290224 (-) |
| G266660 | NA | other | upstream | 1872709 | 7439085 ~ 7441435 (-) |
