G265156


Basic Information

Item Value
gene id G265156
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5668902 ~ 5689574 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU300925
CCGGCAGCGAGAGGAGGACGGCAGCTCCCAAAACGGTAAATACGATGACCATGGAGGTGCTTTTCATGATGTTGGCTTAGATGCAAAACTGTATGGCTGTCTTGGTCGTGCCGTACTCTTCCACTTTTAAGACAACGAAGTGACCAATTAGCGATGAACACGAGTAGACTGATGAAGAGTATGTGAGAGTGATGAAGGATTCAAGGCCTCTTTACAGCCTCCTCCTGTTTAAGACCCTTTTGATGAAGGCGCTAAAACAACTCAAAATCCTTCCAAATTAGGACTTATGACTCGTGACGAAGGTCTACTTCAAAACGTGAATTATAGAGACTTTCTGTGGTGAGATTTTCTCCTGCTTTAGTGGACGTTTTTCTCCGGTTTCTTTCGTTCTTTCCTCTGTAGTAGTGCCTCTGTGTGAGGGAACATTCCACTCGTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300925 True 438 lncRNA 0.45 2 5668902 5689574

Neighbor

gene id symbol gene type direction distance location
CI01000063_05639341_05650366 NA coding upstream 18220 5639290 ~ 5650682 (+)
CI01000063_05597755_05613489 GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S coding upstream 54256 5597324 ~ 5614654 (+)
CI01000063_05563124_05584474 NA coding upstream 83798 5563124 ~ 5585104 (+)
CI01000063_05490285_05556254 PRKCEA, PRKCE, PRKCEB coding upstream 112440 5490285 ~ 5556462 (+)
CI01000063_05466326_05468126 SIX3, SIX3A, SIX3B, SIX3.L coding upstream 199620 5466052 ~ 5469282 (+)
CI01000063_05894405_05894580 NA coding downstream 204831 5894405 ~ 5894677 (+)
CI01000063_05922194_05935361 ITGB3B, ITGB3 coding downstream 232620 5922194 ~ 5936249 (+)
CI01000063_05946534_05948489 NDEL1A, NDEL1B, NDEL1 coding downstream 256960 5946534 ~ 5948532 (+)
CI01000063_05954897_05957678 ARMC7 coding downstream 265323 5954897 ~ 5957753 (+)
CI01000063_05973598_05981144 NA coding downstream 284024 5973598 ~ 5981144 (+)
G265198 NA non-coding upstream 178096 5490577 ~ 5490806 (+)
G265173 NA non-coding upstream 233262 5435399 ~ 5435640 (+)
G265142 NA non-coding upstream 285978 5382707 ~ 5382924 (+)
G265141 NA non-coding upstream 286423 5382191 ~ 5382479 (+)
G265153 NA non-coding downstream 642 5690216 ~ 5712916 (+)
G265246 NA non-coding downstream 15519 5705093 ~ 5706882 (+)
G265252 NA non-coding downstream 28046 5717620 ~ 5717948 (+)
G265253 NA non-coding downstream 30557 5720131 ~ 5720622 (+)
G265254 NA non-coding downstream 33572 5723146 ~ 5723354 (+)
G262436 NA other upstream 2954385 2713615 ~ 2714517 (+)
G262423 NA other upstream 3425937 2241408 ~ 2242965 (+)
G262194 NA other upstream 4523895 1139352 ~ 1145007 (+)
G262060 NA other upstream 4958348 710110 ~ 710554 (+)
G261984 NA other upstream 5001520 665800 ~ 667382 (+)
G265391 NA other downstream 224209 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 645704 6335618 ~ 6338283 (+)

Expression


Co-expression Network