XLOC_010372


Basic Information

Item Value
gene id XLOC_010372
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 1948025 ~ 1949069 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021778
CCGAAACCCNCCTTTGCGAGATTCGCTGCATCTATACCTGATTTGCGTTCAAAATGCCTGCTTCATTATTTCATAGTAGGAGCAAACATGCCTTAAGAAAATAAGTAGGTTTGAAACTTTAGTAACCATAAAAAGTACGCCAGGTGGATGCCTTTCTACTCCAGGAAGCCGCAGCCTACGGCCTGAAGGAGGAAGAGGACGCGGTCAGTTTGAAATagctgaatcgATGACATCCTGAAAGCAGCAATACAATTAAGGTACGTTTTCAttgcttcattttttaaaaccacttaTAGTTGTACAGTTTGATGTTAGTTTAAATATAACTATGTTAGTGATCAGTATTCATACCTAGGATAACAATTCTTGTTTTACGAAAGGTAACTTGGCTTGCTTGCCCTAATGTCATGTTTGCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021778 True 416 lncRNA 0.39 2 1948025 1949069

Neighbor

gene id symbol gene type direction distance location
XLOC_010371 ascc3 coding downstream 190504 1504280 ~ 1757521 (-)
XLOC_010370 sim1a coding downstream 445002 1465624 ~ 1503023 (-)
XLOC_010369 NA coding downstream 595019 1350971 ~ 1353006 (-)
XLOC_010368 NA coding downstream 729455 1204142 ~ 1218570 (-)
XLOC_010367 irx2a coding downstream 1384293 555746 ~ 563732 (-)
XLOC_010373 hace1 coding upstream 402451 2351520 ~ 2390931 (-)
XLOC_010374 hpxb coding upstream 445124 2394193 ~ 2414063 (-)
XLOC_010375 wdr26a coding upstream 533429 2482498 ~ 2504005 (-)
XLOC_010376 adcy3a coding upstream 566154 2515223 ~ 2558653 (-)
XLOC_010377 lyplal1 coding upstream 688409 2637478 ~ 2650375 (-)
XLOC_010626 CR392024.2 misc upstream 18946043 20895112 ~ 20895175 (-)
XLOC_010366 NA non-coding downstream 1395398 551682 ~ 552627 (-)
XLOC_010364 NA non-coding downstream 1580881 354846 ~ 367144 (-)
XLOC_010363 NA non-coding downstream 1594245 346263 ~ 353780 (-)
XLOC_010378 CU929110.1 non-coding upstream 786607 2735676 ~ 2735799 (-)
XLOC_010380 NA non-coding upstream 860648 2809717 ~ 2812008 (-)
XLOC_010384 NA non-coding upstream 1398937 3348006 ~ 3348709 (-)
XLOC_010386 NA non-coding upstream 1835805 3784874 ~ 3796633 (-)
XLOC_010388 NA non-coding upstream 2229967 4179036 ~ 4179967 (-)

Expression


Co-expression Network