G265252


Basic Information

Item Value
gene id G265252
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5717620 ~ 5717948 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU301026
TCTAGTGATGGGCGATTAAAAAAAAACTGCTTAATGACGCTTCGAAGATTTACGAATCTTTTGTTTCAAATCAGTGGTTCGGAGTGTGTATCAAACTGCCAAAGTCACGTGATTTCAGTAAATGATGCTTTGTTACCTCATAAGTGTTTCAGAATTTCAATCGTTCACCACTGGGGGGTGTGACTTTGATACGCGCTCCGAACCACTGATTCGAAAAAAAAATTCTTATAAATTCGAAGCTTCATGAAACAGTGTTTTGAAATCACCCATCACTAGATATTGTTGAATAAAGTCATTATTTTGTTTTGTTTTTTGGCACATAAAAAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU301026 True 329 lncRNA 0.35 1 5717620 5717948

Neighbor

gene id symbol gene type direction distance location
CI01000063_05673923_05678546 NA coding upstream 38895 5673829 ~ 5678725 (+)
CI01000063_05639341_05650366 NA coding upstream 66938 5639290 ~ 5650682 (+)
CI01000063_05597755_05613489 GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S coding upstream 102974 5597324 ~ 5614654 (+)
CI01000063_05563124_05584474 NA coding upstream 132516 5563124 ~ 5585104 (+)
CI01000063_05490285_05556254 PRKCEA, PRKCE, PRKCEB coding upstream 161158 5490285 ~ 5556462 (+)
CI01000063_05894405_05894580 NA coding downstream 176457 5894405 ~ 5894677 (+)
CI01000063_05922194_05935361 ITGB3B, ITGB3 coding downstream 204246 5922194 ~ 5936249 (+)
CI01000063_05946534_05948489 NDEL1A, NDEL1B, NDEL1 coding downstream 228586 5946534 ~ 5948532 (+)
CI01000063_05954897_05957678 ARMC7 coding downstream 236949 5954897 ~ 5957753 (+)
CI01000063_05973598_05981144 NA coding downstream 255650 5973598 ~ 5981144 (+)
G265153 NA non-coding upstream 4704 5690216 ~ 5712916 (+)
G265246 NA non-coding upstream 10738 5705093 ~ 5706882 (+)
G265156 NA non-coding upstream 28046 5668902 ~ 5689574 (+)
G265198 NA non-coding upstream 226814 5490577 ~ 5490806 (+)
G265253 NA non-coding downstream 2183 5720131 ~ 5720622 (+)
G265254 NA non-coding downstream 5198 5723146 ~ 5723354 (+)
G265255 NA non-coding downstream 6440 5724388 ~ 5724643 (+)
G265257 NA non-coding downstream 11646 5729594 ~ 5729833 (+)
G265261 NA non-coding downstream 31062 5749010 ~ 5749214 (+)
G262436 NA other upstream 3003103 2713615 ~ 2714517 (+)
G262423 NA other upstream 3474655 2241408 ~ 2242965 (+)
G262194 NA other upstream 4572613 1139352 ~ 1145007 (+)
G262060 NA other upstream 5007066 710110 ~ 710554 (+)
G261984 NA other upstream 5050238 665800 ~ 667382 (+)
G265391 NA other downstream 195835 5913783 ~ 5919029 (+)
CI01000063_06335618_06338138 HOXB8B other downstream 617330 6335618 ~ 6338283 (+)

Expression


Co-expression Network