G265776


Basic Information

Item Value
gene id G265776
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 6185934 ~ 6188664 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU301670
TCAACCATCATACATCGATAACTTTCATTCAATTTAATGTGGAGAGGGTGGACCACGAGTCAAAGAGATCCGTCACTGGGGAGAGGGACAGCATTTCATAACCATTAAATGATGTGCGCTACAAATCTCTGACTGACCACAGAGACACAGCTCTCCGTACAGTGGAATGAGAGGTGGCTGAACGAACGGCAGAAGTTAGGTGTAGAAAGTTTGAGGAACTTTATGCAATTAACTGCCAAGCTACAAGTTTCAAAACCCCATGGCATGTGTGTATGTGTTCGCGTGGGTTTGTGGCAGTAACGGTTTATGTGTGGTTTGGGCTCAAGTCTTCTGAAGTCAGAGAAGGCTCGAGACGATACTCGCTCAACCACAAAACCACACTAGGAACAAGTGAGTCACACTACAGTCACCTCCTCAGGTGGACAAGGGGAAGGAATGAGTGAGATGGAGAGGCGGGGACGGACGATGACTACAAAAGAAAAACATCATGTTGCATGGTACAAACACGAGAAATAGAGAGCTGTTCGTGTCTACACTTTGTGGAGTGTTTGAAAAACAAGGACATGCCACATCAAATTAATTACAGATTTAAATCATGCCGAATAGATCCTGACATGGACAAAAAATACCAGAGGGATCCGTCATTATTGTGTTTCACTGTTTCCTTTCATTCACTTGAGTAACACTGAAAGCACCTATAAACTAAACAGCACTTCCTTTCTGGCAAATGTTTGTCATCCTAAACGGGTAGACCTTATTTTCACTGGAAGGAGGTCACAATGTCGTAACAATATTGTAATATAAAACAAATAATTGTGTCTTTTATTTAGTATTGGAGCAACACAGCCAATTTCCTATAAAGGTTGAGCAACAAGGATTCTCAAATGAGCCATAAAAGACATTTTGACTTTTTCCCAACACAACTTTGGCTGTTTACCTGCATGTTAAATTACAATCATTTCTGGAAAACATCATTGTGCAAGATACTTGTACACTAGCTGGGAAGGTGGGCCCAGATGTGCGTAATCAACAAAAGGCATTGATTTATCTGATCAAGTTCCATATGTAACTAATCATTCACTTCTGAAAGAGAGTGGAGACATATGGCTTGTGACTGACTAAAAAGTGCACTTCCTTGGTTTGTGGAAATCCTGCTTTTTTAACATTAATACCTAAAAGTCAGGTTCCATGTATGTCACTTGCACTGTAGTACCAGAGCTGAGATGCCATTGTTTTCAAGCATAAATGGGTTTATGAATTTACAGCTGTCTGTGGAGTTTCATAATAAATATAGACATCAACACTGACATTTATTTCCGATCCCTAAAATCTGAATAAAAACAGTTACTAACAAATCTGAGTTTGACTCTACTTCCTTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU301670 True 1382 lncRNA 0.40 2 6185934 6188664

Neighbor

gene id symbol gene type direction distance location
CI01000063_06110909_06118565 NA coding downstream 66015 6110909 ~ 6119919 (-)
CI01000063_06018383_06022776 NA coding downstream 162447 6018083 ~ 6023487 (-)
CI01000063_06011344_06017382 KCTD2 coding downstream 168552 6010663 ~ 6017382 (-)
CI01000063_05992697_06005239 SLC16A5A, SLC16A5 coding downstream 180575 5992579 ~ 6005359 (-)
CI01000063_05983940_05990611 NA coding downstream 195323 5983455 ~ 5990611 (-)
CI01000063_06271330_06273137 CHM2A, CHMP2A, BRAFLDRAFT_115689, BC2, CHMP2A.L coding upstream 82099 6270763 ~ 6273137 (-)
CI01000063_06291489_06291799 NA coding upstream 102550 6291214 ~ 6291799 (-)
CI01000063_06332215_06332433 NA coding upstream 143485 6332149 ~ 6332433 (-)
CI01000063_06404520_06407506 PSME3 coding upstream 215160 6403824 ~ 6407676 (-)
CI01000063_06652744_06663333 DHX8 coding upstream 463472 6652136 ~ 6663590 (-)
G265789 NA non-coding downstream 8619 6175677 ~ 6177315 (-)
G265802 NA non-coding downstream 34735 6138691 ~ 6151199 (-)
CI01000063_05950749_05954473 NA non-coding downstream 231376 5949613 ~ 5954558 (-)
G265889 NA non-coding downstream 254130 5928742 ~ 5931804 (-)
G265890 NA non-coding downstream 259899 5922517 ~ 5926035 (-)
G265960 NA non-coding upstream 14301 6202965 ~ 6235379 (-)
G266002 NA non-coding upstream 66360 6255024 ~ 6255223 (-)
G266003 NA non-coding upstream 66913 6255577 ~ 6256715 (-)
G266005 NA non-coding upstream 70531 6259195 ~ 6259397 (-)
G266006 NA non-coding upstream 70802 6259466 ~ 6259691 (-)
CI01000063_05616519_05617045 NA other downstream 568822 5615806 ~ 5617112 (-)
G265567 NA other downstream 931994 5183279 ~ 5183287 (-)
CI01000063_05189361_05189645 CRIPT other downstream 995317 5188403 ~ 5189645 (-)
CI01000063_02725759_02726399 NA other downstream 3459399 2725759 ~ 2726535 (-)
CI01000063_02326799_02327290 CBY1 other downstream 3858215 2326741 ~ 2327309 (-)
G265976 NA other upstream 99494 6283058 ~ 6290946 (-)
G266797 NA other upstream 1100831 7289495 ~ 7290224 (-)
G266660 NA other upstream 1250421 7439085 ~ 7441435 (-)

Expression


Co-expression Network