XLOC_010376 (adcy3a)


Basic Information

Item Value
gene id XLOC_010376
gene name adcy3a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 2515223 ~ 2558653 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020418
ATGCCTCGTAACCGGGCCTTTTCAGAGCCGGAGTACTCTGCGGAGTATTCAGCGGACTGCTCAGTCACCTTGCCCTCTGACCCCGGGCAGGCGGTGGGACGCACCCATGAGGTGACGGTGCGCAGCTCTGGCTGCTGCCTGTGTCTGCCGCGCTTCATGCGTCTGACCTTTGCGCCAGACTCTCTGGAGAATCTCTACCAGACCTATTTCCGACGGCAGCGGCACGAGACCCTGCTGGTGCTGGTGGTGTTCGCGGCGCTCTTTGACTGCTACATCATTGTGATGTGCACTGTGCTCTACACGGCCGATAAGCTGGCATCGGTGGCCGTGGCGTCTGTGGGTCTGGCTGCAGATGTGCTGCTGTATTTGCTGTGCCGGTACGGCCTGCTGCCGGACCGCGTCACCCGCCGCCTCGTGCCCTACGCCCTATGGGTGCTCATAGCAGCCCAGATCTTCTGTTATCTAGGATTGAACTTTGCCCGCTTCCATCAGCCCAGCGACACCGTAGGCTGGCAGGCGTTTTTCAGCTTCTCCTTCTTTCTGACGCTGCCGCTGAGACTGACCCCTATAGTGCTGATCACCAGCGTGTCCTGCGGGGTCCACACCCTGGTCCTGGGGGTCACCATCGCCCAGCAGCAGCAGGAGGACATCCAGGGTGCCGCTTTGGGGAGACAGTTGCTGGCCAACATGGTGATCTACGTCTGTGCCATCACAGTGGGCGTCATGTCGTATTACATGGCCGACCGCAAACACCGGAAGGCCTTTCTGGAGGCGCGTCAGTCTCTGGAGGTCAAACTCAACCTGGAGGAGCAAAGCCAGCAGCAGGAGCGTCTGCTGTTGTCCATCTTGCCCAAACACATCGCAGACGAGATGCTCCAGGACATGAAGAAGGAAGCCAGTCAGAAGGAGATGCAGCAGTTCAACACCATGTACATGTACCGGCACGAGAACGTCAGtatTCTGTTCGCAGACATCGTGGGCTTTACTCAGCTGTCCTCGTCCTGCAGCGCGCAGGAACTGGTCAAACTCCTCAACGAACTGTTTGCGCGTTTCGACAAGCTCGCGGCGAAATACCACCAGCTGAGGATCAAGATTCTGGGCGACTGCTATTACTGCATCTGTGGCCTTCCAGACTACCGAGAGGACCACGCCGCCTGCTCTATCATGATGGGTTTGGCCATGGTTGAGGCCATCTCGTACGTCCGGGAGAAGACGCAGACGGATGTGGACATGCGTGTCGGTGTTCACTCGGGGACGGTTTTGGGTGGTGTGCTCGGACAGAAGCGCTGGCAGTACGACGTCTGGTCCACTGATGTGACCGTAGCCAACAAGATGGAGGCCGGAGGAATACCAGGGCGAGTGCACATCTCCCAGAACACCCTGGAGTGTTTGCACGGGGAGTTTGACGTGGAGCCGGGGAACGGAGGCGACCGATGCGAGTACCTGAAGGAGCGCGGCATCGAAACCTACCTGGTGGTCCTTCCCAAGGGGCCAGTGGGCAAAAATGGCATCAACGGAGTAAAGCTTTCGGTGACGTCGTCTAATGGTAATTCTCCATTGCTGATCAACACTACGGAGTGCAACGGAAGCGTCCACACGGCCTGCACCACGCCGGAGGATCCAGAAGAGCTCGACACACGGgtgGTGAACCCGTCGTTCCCGAACCCGCGTCGTCGATTGCGTCTACGAGATCTGGCGGAGAGAGTGATCGACGCTCAGGAGAACGAACAGGAGCTCAATAAACTCCTCAACGAAGCTCTGCTGGAGAGAGAAACTGTGCAGGCGCTGAAAGGGAAGTACACCAACCGTCTGTCCCTGCGCTTCACCGACCCCGAGCTGGAGACGCGCTTCTCAGTGGAGAAGGAGAAGCAGAGCGGCGCCGCGTTCAGCTGCTCGTGTGTGGTTTTACTCTTCACTGCTGTCATGGAGGCCCTCATCGACCCCTGGTTGGTTGCGAACTATGTGACTCTGGCTGTAGGGGAAGTGCTGCTGCTTATTCTTACCATCTGTTCTCTGGCGGCCATTTTTCCCCGGGTATTTCCAAAGAGGTTGGTGTCGTTCTCCACCTGGATTGACCACACACGCTGGGCTCGCAACACTTGGGCCATGGCTGCCATTTTCATAGTCACATTGGCGGACATAGTAGATATGTTGAGCTGTCGTGCGCCTCAGACCTCCACAGTTGAGTCCACCGCGGTTCCTCCAGTCGTTACTGCCATCCGTGGCTGTGCAGAAAATCCCAAATACTACAGTTTCATCGCCGTCCTGGCGCTCATCGCCACCACCATGCTGGTGCAGGTCAGCCACATGGTCAAACTCACGCTCATGCTGCTGATCACTGTGGCCACCGGTGCGGTCAACATTTACAGCTGGAGCCAAACCTTTGACCTCTACGACCTCACTCGCTTCAAGGAGTACAGGGTTAATCTGGTGCCGTCCAAATACACCATGAGTGTGATGATCTTCATCATGATGGTCAGCTTCTACTACTTCTCCCGACATGTAGAGAAACTGGCCCGCACACTGTTTCTATGGAAGATTGAAGTGCACGAGCAGAAGGAGAAGGTGTATGAGATGCGGCGCTGGAACGAGGCTCTGGTCACTAATATGCTCCCGGAGCACGTCGCCAGACACTTTCTGGGCTCTAAGAAGAGAGATGAGGAGCTCTACAGCCAGTCCTACGATGAGATTGGAGTCATGTTCGCCTCCATCCCAAACTTCTCCGACTTCTACACGGAGGAAAGCATCAACAATGGCGGGATCGAGTGCCTGAGGTTCCTCAATGAAATCATCTCTGATTTCGATAGTCTTTTGGACGAGCCACAGTTTCGCTGTATAACCAAAATCAAGACGATTGGCAGCACCTACATGGCAGCATCAGGAGTCACCTCAGACAATAACACCAACGGCTACGCTTGTATGAAGAAAGAAGAGATTTCCGACAGAGAGCGTTGGCAGCATTTGGCGGATCTTGCTGACTTTGCTCTGGCCATGAAAGTCACGCTGATGAACATCAACTACCAGTCCTTCAATAACTTCATGCTCCGCATCGGACTGAATAAAGGGGCCGTTTTGGCGGGTGTTATTGGGGCCCGTAAACCTCACTTTGACATCTGGGGAAACACTGTGAACGTCGCCAGTCGTATGGAGTCCACAGGGGTGATGGGAAACATCCAGGTGGTCGAGGACTGTTACTGCATCCTGAAGGACTACGGTTTCCGCTTCGTCAGGCGGGGTCCCATATTTGTCAAAGGCAAAGGAGAGCTGCTCACATACTTCCTCAAGGGACGCGAAAAACAAGGCTCCTTCATCAACGGCTCGTTTGTCACCCTGCCGCACCAAGTGGTGGACAGCTCttga

Function

symbol description
adcy3a Predicted to enable ATP binding activity; adenylate cyclase activity; and metal ion binding activity. Predicted to act upstream of or within cAMP biosynthetic process and intracellular signal transduction. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human ADCY3 (adenylate cyclase 3).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0006171 cAMP biosynthetic process biological_process
GO:0009190 cyclic nucleotide biosynthetic process biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0004016 adenylate cyclase activity molecular_function
GO:0016829 lyase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016849 phosphorus-oxygen lyase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-111027-6 Predicted to enable ATP binding activity; adenylate cyclase activity; and metal ion binding activity. Predicted to act upstream of or within cAMP biosynthetic process and intracellular signal transduction. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human ADCY3 (adenylate cyclase 3).

Ensembl:

ensembl_id ENSDARG00000077145

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020418 True 3360 mRNA 0.56 20 2515223 2558653

Neighbor

gene id symbol gene type direction distance location
XLOC_010375 wdr26a coding downstream 11218 2482498 ~ 2504005 (-)
XLOC_010374 hpxb coding downstream 101160 2394193 ~ 2414063 (-)
XLOC_010373 hace1 coding downstream 124292 2351520 ~ 2390931 (-)
XLOC_010372 NA coding downstream 566154 1948025 ~ 1949069 (-)
XLOC_010371 ascc3 coding downstream 757702 1504280 ~ 1757521 (-)
XLOC_010377 lyplal1 coding upstream 78825 2637478 ~ 2650375 (-)
XLOC_010378 CU929110.1 coding upstream 177023 2735676 ~ 2735799 (-)
XLOC_010379 tgfb2 coding upstream 186353 2745006 ~ 2807527 (-)
XLOC_010380 NA coding upstream 251064 2809717 ~ 2812008 (-)
XLOC_010381 acot22 coding upstream 255580 2814233 ~ 2818170 (-)
XLOC_010626 CR392024.2 misc upstream 18336459 20895112 ~ 20895175 (-)
XLOC_010369 NA non-coding downstream 1162217 1350971 ~ 1353006 (-)
XLOC_010368 NA non-coding downstream 1296653 1204142 ~ 1218570 (-)
XLOC_010366 NA non-coding downstream 1962596 551682 ~ 552627 (-)
XLOC_010364 NA non-coding downstream 2148079 354846 ~ 367144 (-)
XLOC_010384 NA non-coding upstream 789353 3348006 ~ 3348709 (-)
XLOC_010386 NA non-coding upstream 1226221 3784874 ~ 3796633 (-)
XLOC_010388 NA non-coding upstream 1620383 4179036 ~ 4179967 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000065_03442791_03477709 DNAJC27, ADCY3A, ADCY3 coding CI01000065 null 3442595 ~ 3477709 (-)
bowfin (Amia calva) AMCG00003659 adcy3,LOC107688975 coding CM030121.1 CM030121.1 13290299 ~ 13316898 (-)