Item | Value |
---|---|
gene id | G266817 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000063 |
NCBI id | null |
chromosome length | 7808773 |
location | 7351818 ~ 7352264 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU302846 | True | 447 | lncRNA | 0.35 | 1 | 7351818 | 7352264 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000063_07217465_07224133 | NA | coding | downstream | 127496 | 7216986 ~ 7224322 (-) |
CI01000063_07205887_07209986 | NA | coding | downstream | 141147 | 7205855 ~ 7210671 (-) |
CI01000063_07147043_07192035 | MYO1D | coding | downstream | 159783 | 7146006 ~ 7192035 (-) |
CI01000063_07114269_07117313 | PSMD11 | coding | downstream | 234020 | 7113407 ~ 7117798 (-) |
CI01000063_07092189_07106801 | OGFOD3 | coding | downstream | 244063 | 7092090 ~ 7107755 (-) |
CI01000063_07356051_07365604 | OSBPL7 | coding | upstream | 3738 | 7356002 ~ 7365604 (-) |
CI01000063_07369762_07372353 | MRPL10 | coding | upstream | 17448 | 7369712 ~ 7372353 (-) |
CI01000063_07377062_07377408 | PRR15LB | coding | upstream | 24069 | 7374771 ~ 7377408 (-) |
CI01000063_07394616_07396752 | NA | coding | upstream | 42352 | 7394616 ~ 7399019 (-) |
CI01000063_07411237_07413430 | NA | coding | upstream | 57911 | 7410175 ~ 7413430 (-) |
G266818 | NA | non-coding | downstream | 181 | 7351337 ~ 7351637 (-) |
G266808 | NA | non-coding | downstream | 19204 | 7332339 ~ 7332614 (-) |
G266795 | NA | non-coding | downstream | 69560 | 7281932 ~ 7282258 (-) |
G266677 | NA | non-coding | downstream | 75253 | 7266521 ~ 7276565 (-) |
G266772 | NA | non-coding | downstream | 126401 | 7225217 ~ 7225417 (-) |
G266669 | NA | non-coding | upstream | 84533 | 7436797 ~ 7438252 (-) |
G266685 | NA | non-coding | upstream | 112205 | 7464469 ~ 7467147 (-) |
G266827 | NA | non-coding | upstream | 128370 | 7480634 ~ 7480877 (-) |
G266647 | NA | non-coding | upstream | 159672 | 7511936 ~ 7515695 (-) |
G266797 | NA | other | downstream | 61594 | 7289495 ~ 7290224 (-) |
G265976 | NA | other | downstream | 1060872 | 6283058 ~ 6290946 (-) |
CI01000063_05616519_05617045 | NA | other | downstream | 1734706 | 5615806 ~ 5617112 (-) |
G265567 | NA | other | downstream | 2097878 | 5183279 ~ 5183287 (-) |
G266660 | NA | other | upstream | 86821 | 7439085 ~ 7441435 (-) |