XLOC_010381 (acot22)


Basic Information

Item Value
gene id XLOC_010381
gene name acot22
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 2814233 ~ 2818170 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020426
TCCTGCAGTGATCACAGGGATAACATGTATGCAGCACTGAAATTTGCCTTTATGCCTTTTGCAAGATCCCTTGCGAAGGTGCACTACAGTTCAGGAGTCAGCATCAAGCTTCTGCCCAGTTACAAGTGCTCATTCGAAGACCCGGTGCATGTGATGGTGAGCGGCTTAAATCCACATCAACGTGTGAATCTGCGCTCCAAAATCACGGATGAAGGTGGACGTGATTTCAAGGCTTCAGCGATCTACCTAGCAGATGACAATGGCCAAATTGACCTCAAGCGCGACTCTTCTGCTGGCGGGAGCTTTTCTGGAGTGGAACCGATGGGTTTATTCTGGGCTCTGAAAGCAGATCTATTAAGCTGCAAGTTCAAGCTGAAAGATGTGACGCGTCCAGCTCTTGTTGACATTGAGGTTGTCGGTGAGGATGAGAAAGTCCTGGCCAAAGTGACCAACGAGAGACACTGCCTGAGCGAGGGTGTCCGGAGAAGTCTTGTCACCGAAGGAAGGATCAGAGGGACTCTTTTTATGCCCACTGgtaatggaCCATTTCCTGGGATTTTGGATACTTACATACTTAAAGGAGGTCCTTTTGAGTTGAGAGCAGCTCTGCTGGCAAAGAGAGGCTTTGCAGTTTTAGCCTTGGCCTACCAAAACTACCAGGATTTACCCAAAAAAGCTGACAAATTTCACCTGGAGTACTTTGAAGAAGGTCTAGATTTCCTACGCCGACAGCCAGAGGTGAAAGGTCAAAAAATCGGCCTTCTGTCCATATCAAAGAGTGGAGATCTCGCTTTGTCCATGTCAACGTTTCTGCCGGACATAACAGCTGCTGTTTGGATCAACGGATGCAATGCCAACAGCCTGATCCCGCTCTACTACAAAGACATGTACATTCCACCTCTCACGCTTGactttaagaaaaagaaaatgacagCATTAGGCCTCGTAGACATGCTAGAGGTTGTGAATGACCCGATGTCTAAAGAAGGTCTTCCTACTGTTATTCCCATCGAGCGTGCCTCTGCTAGTTTCATGTTCATCGCTTCAGAAGCTGACATGAACTGGCGGAGCGTCTATCATGCAAAGTTAGCATGCGACAGGCTCAAAGCACATGGGAAAAACAACTATGAGCTGGTGAAGTATGAAAAAGCTGGTCACTTTATCGAGGTGCCCTACATGCCATTTTGTCTGGCTGCATTTCATGGCGTACTTGAGCAACCGGTTTTGTTTGGCGGGGAACCCAAAGCTCATTCAGAGGCACAGGTGGATGCCTGGCAAAGGATTATCATATTCTTTAAAAGAACCCTCGGCAGCTGAGCTGTAAGGGAATATACACTATAGCCATGACATCCAATTATAGTGCTGGCCTGAATTACATCTCTTTATATTTTTAGCACTGATTATATTCAGTGCTAAAAATATAATCACACCAGTAATGTTTTGCTCTTAAGTTTACTGATGCctacatattaaaatgatttctgcaaaattgttacAAACAAAATCCATATGGGAtgaatttaaacattcatttattttccttcagcctagtctctttattaattaggggtcaccacagcggaaacaaccgccaacttatccagcaaaagtTTTATGtaacagtactgggaaacacccatacactctcactcagtttagattttagattttatattttacagtttaataaaataaaataaaatgaataaaataagctgattattttttttattttatgtttaggtCAATTACAGCTTCTGAGTTGTGTTTGTTAAAGTCATAAGTGTCTTGCAGTGCTGCTTCTGCAATAAACGGTGAGCAAATTACCTTTCAACAA

Function

symbol description
acot22 Predicted to enable acyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to act upstream of or within lipid metabolic process.

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process
GO:0006637 acyl-CoA metabolic process biological_process
GO:0047617 acyl-CoA hydrolase activity molecular_function
GO:0016790 thiolester hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-110407-17 Predicted to enable acyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and fatty acid metabolic process. Predicted to act upstream of or within lipid metabolic process.

Ensembl:

ensembl_id ENSDARG00000058945

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020426 True 1837 mRNA 0.43 3 2814233 2818170

Neighbor

gene id symbol gene type direction distance location
XLOC_010380 NA coding downstream 2225 2809717 ~ 2812008 (-)
XLOC_010379 tgfb2 coding downstream 6706 2745006 ~ 2807527 (-)
XLOC_010378 CU929110.1 coding downstream 78434 2735676 ~ 2735799 (-)
XLOC_010377 lyplal1 coding downstream 163858 2637478 ~ 2650375 (-)
XLOC_010376 adcy3a coding downstream 255580 2515223 ~ 2558653 (-)
XLOC_010382 cdcp1a coding upstream 29395 2847565 ~ 2870522 (-)
XLOC_010383 csf3r coding upstream 285012 3103182 ~ 3127749 (-)
XLOC_010384 NA coding upstream 529836 3348006 ~ 3348709 (-)
XLOC_010385 GRIK3 coding upstream 645557 3463727 ~ 3678976 (-)
XLOC_010386 NA coding upstream 966704 3784874 ~ 3796633 (-)
XLOC_010626 CR392024.2 misc upstream 18076942 20895112 ~ 20895175 (-)
XLOC_010372 NA non-coding downstream 865164 1948025 ~ 1949069 (-)
XLOC_010369 NA non-coding downstream 1461227 1350971 ~ 1353006 (-)
XLOC_010368 NA non-coding downstream 1595663 1204142 ~ 1218570 (-)
XLOC_010388 NA non-coding upstream 1360866 4179036 ~ 4179967 (-)
XLOC_010390 CU469524.1 non-coding upstream 1392307 4210477 ~ 4211935 (-)
XLOC_010391 CU469524.2 non-coding upstream 1416557 4234727 ~ 4267736 (-)

Expression


Co-expression Network