CI01000065_00444905_00447425


Basic Information

Item Value
gene id CI01000065_00444905_00447425
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 444680 ~ 447425 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_00444905_00447425.mRNA
ATGGCTACTCATCCTGAATTTCAGCTTGACCTAACTGACTGGCCCTCAGTCGCAGACTCTCTTCCACAACAGACAAAGGCTAACAGTATGCCCACAAGGGATGTTCACTGTTTTAAATGCTCCTTGCCTGAATTCACCACTCGTACATGCCCTAACTGTAGTCCAGGAATAAAGCCACGTTCGCCTCCAACAGAGCCCCCAAGAGTGACGGGTGATACTGTCAATAGACCGCCGGACTGTTTCTATCATCGCTTTGCTGTTGTCCATAATCTATCTTCTCCTGTTATCTTGGGAATGGACTTTATGTTGAGGTCTTCAGTCACAATCCATGTTCCGTCTAGGTCAGTGGTGCTCGGTGATGAGCCAATGCCCCTTGAGGAGTTGGAGGGCAATGACTTAACTATGCCTGTCCCTGATTTGTCATGCCTGGAGGTCGGCTCTTCTTTCCTGTCTGAAAAGGTTAAAGAAGCATCCCTAAATAACGAACAGAAAAGCAAATTGACTGAATTGCTCGAGACCTTCAGTGGTTTGTTTGACGGACATTTGGGATGCACCTCGCTAGTAGAGCATGAGATTGTCACAGGTGATGCAAAACCAGTTCACCTTGCCCCTTACCGCACCTCTCCTGCTAAAAAGGAACTCATTGAATCTCAAATCAAGGAGATGTTGAAGGAAGGAATAATTGAACCCGCTTCTGGTCCTTGGGCTGCCCCAGTCGTAATCGTCCCAAAACAATCGGGTGAGCCAAGATTCTGTGTTGATTATCGTGCACTCAATAAGCTCACAGTCAAAGACTCATATCCACTCCCGAGGATTGATGAATCTCTCGACTTCCTGGCTAGAGGGACTTTGATTTCCACCAGTGACTTGGCCAGAGGCTATTGGCAGGTGGCGGTGGCGGAGAACTCAAACTCAGAGGCTTATGAACACTGTAATCGCTGGTCACATCTACAAGTCTTGTGCCGTCTACTTAGACGATATTGCGGCTCTTATCGTATTACACAAAAGCTGTCAGAAGTGAACTACAGACTCGTTGATGTGAATACAGGAGCAGACGCAGGTGTATTTCATGTCGCAAATCTGCTGCCTTTTCGTACCTGGGACCCACTTGTTGAAACCGAGACTGTGCCTGCAGATGGTTCTGCTGAAGAAGCAACAACTGACAGTTCTTTGCTGAATGACATACCTGAGGAAACAAGTAGTGGTGCTACCGCAATGAACTTCACACTCCTGCAAATTAAGGATGAATACAGTCGCCCAGTAACTACAAGTGTTCATGATCTGTCAGGAAGTGTGGACAGTGTTGGTTGTTTTCCTGACCTACAGGTTGACTCTGGAACTCAGAACGATGACTTGACTGTTGATGATAATGATCTTGACAGACACCACTATGACTTAAGACCTTGACGTGCACCAAGAATCACCTTAGACTGGTCGACTAACAGGTGGACGAACGTGTACCACACAGACAAACTTGATCTTAAATAGTGTGTTAATGTAAATGTGGGTTCATATGTTTTGTTTGACACTGTGAAGTGCAAAAGGTTTACCACCTTCTGTATAAAAGAAAAGGGAATTAGCGTAAATGATCAGTCTGTTGACATGTTGTTTGTTATAGTGTTGAACAAAAAA

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_00444905_00447425.mRNA True 1632 mRNA 0.45 4 444680 447425

Neighbor

gene id symbol gene type direction distance location
CI01000065_00330696_00340165 NA coding downstream 103908 330592 ~ 340772 (-)
CI01000065_00253168_00255665 NA coding downstream 188970 252691 ~ 255710 (-)
CI01000065_00120723_00133111 MBOAT1 coding downstream 311569 120406 ~ 133111 (-)
CI01000065_00097164_00097583 NA coding downstream 347090 96904 ~ 97590 (-)
CI01000065_00076766_00091631 NA coding downstream 353049 76685 ~ 91631 (-)
CI01000065_00563411_00579174 MBPB, MBP coding upstream 115423 562848 ~ 580083 (-)
CI01000065_00622545_00624625 NA coding upstream 174698 622123 ~ 624657 (-)
CI01000065_00768127_00769942 NA coding upstream 320147 767572 ~ 770151 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 coding upstream 335311 782697 ~ 793467 (-)
CI01000065_00843437_00865598 FOXO3, FOXO6 coding upstream 396007 843432 ~ 865598 (-)
G267339 NA non-coding downstream 7117 437334 ~ 437563 (-)
G267310 NA non-coding downstream 23520 420939 ~ 421160 (-)
G267294 NA non-coding downstream 31550 412902 ~ 413130 (-)
G267292 NA non-coding downstream 32534 411269 ~ 412146 (-)
G267273 NA non-coding downstream 45521 398942 ~ 399159 (-)
G267411 NA non-coding upstream 56850 504275 ~ 504481 (-)
G267721 NA non-coding upstream 64269 511694 ~ 512168 (-)
G267722 NA non-coding upstream 65088 512513 ~ 512750 (-)
G267728 NA non-coding upstream 77454 524879 ~ 525584 (-)
G267739 NA non-coding upstream 100575 548000 ~ 549479 (-)
CI01000065_00050903_00055774 NA other downstream 390293 50386 ~ 55774 (-)
G267024 NA other downstream 398593 43039 ~ 46087 (-)
G269348 NA other upstream 2861018 3304357 ~ 3312480 (-)
G269679 NA other upstream 3326455 3773880 ~ 3774294 (-)

Expression


Co-expression Network