CI01000065_00466096_00487259


Basic Information

Item Value
gene id CI01000065_00466096_00487259
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 465976 ~ 487278 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_00466096_00487259.mRNA
ACATTTAATGAGAGACTTGGATGACGCTGCTGCATTGGATGTAGAGGCTGTTCGTGAGCTGTGCAGAGCATCGGACTTGCTGCTAAGAACTACCTAGCACACTGATGCAGCATGTAAGCAATGGCTGCTCTGGAATGCCATTTGGGCCTCACCTTAACCAAGACCAGAGCCACATCAGTGAGTGCACCCATGCAGAGAAGTGAGTGTCTGCCAAGCGGCCACTTGGGCAGCAATAGAGAGCCTCGTGTGCCAGCTCGAAACACAGGTGTCCTCCTGTTCCGGTTGTCCCTGGCTCCTCAGACTTTTTCGAAGTGCATCTATGTGGCTCTGATAACGAGGCTTCAGAATATTCAATTCATGAATTATCTCGATGATTGGCTGGTCCACTCAGAGTGTCCAGCAGCACAGTATCAGGATATTGTCCTCAAGCTTTTGAAGGACTTGGGGCTGCGAGTCAATTGGGACAAGAGCATTCTGTTGTCACACCAACAGATATGTTTTTTGGCTCTAGAGTTGGACTCTGTGGCAATGCGGGCGAGCCTTGCTTCAGCTGAAATTGCTATCACTTTGGCAGTTTGTACAGATGATCAAGGCAATGATACATCTCGAGCGCAACGATTAGAGCACGTGATCCAAATGAACCGCTTTGAGTTGCCCATCTCCTCCTTTAAGAAGATCTCTGGCTGCGCTCGACCCTCTTGTGACGTAACAGCTAGCAGACTACGGTGCGCCGTTTGTGACCAAGAGCAGAACGCGCGAAGTGAGGGAATACGAGCAACATTTCAGCACTCTAGCGAAAACCCGCCTTTCCCGTGTTTCAATTGGACGAAAGCAAGAAACTGGCCTTTTGATTGGACAAAACTCACGCCAGCAACAATCATGCTAATAGGAAGTAGAGTTAAACTGTTTCATGTCAGAGAGAAAAGATAAACATAGCCAAAAGGAAGAA

Function

NR:

description
reverse transcriptase/ribonuclease H/putative methyltransferase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_00466096_00487259.mRNA True 949 mRNA 0.48 3 465976 487278

Neighbor

gene id symbol gene type direction distance location
CI01000065_00408239_00434714 NA coding upstream 30569 408148 ~ 435407 (+)
CI01000065_00390457_00395371 SALL3, SALL3A coding upstream 69825 390457 ~ 396151 (+)
CI01000065_00268067_00268655 NA coding upstream 197188 268067 ~ 268788 (+)
CI01000065_00008351_00023809 NA coding upstream 441638 8351 ~ 24338 (+)
CI01000065_00001128_00004874 NA coding upstream 460792 1128 ~ 5184 (+)
CI01000065_00491304_00503042 NA coding downstream 3870 491148 ~ 503458 (+)
CI01000065_00506921_00509678 NA coding downstream 19643 506921 ~ 510257 (+)
CI01000065_00517483_00553268 ZNF236 coding downstream 30205 517483 ~ 553738 (+)
CI01000065_00581819_00588773 NA coding downstream 93597 580875 ~ 588779 (+)
CI01000065_00605004_00618190 ARHGEF2 coding downstream 117133 604411 ~ 619124 (+)
G267336 NA non-coding upstream 29376 436262 ~ 436600 (+)
G267248 NA non-coding upstream 98308 367465 ~ 367668 (+)
G267245 NA non-coding upstream 101312 364456 ~ 364664 (+)
G267231 NA non-coding upstream 113500 352125 ~ 352476 (+)
G267210 NA non-coding upstream 134417 331182 ~ 331559 (+)
G267438 NA non-coding downstream 20904 508182 ~ 508413 (+)
G267441 NA non-coding downstream 24412 511690 ~ 512132 (+)
G267454 NA non-coding downstream 103737 591015 ~ 591219 (+)
G267455 NA non-coding downstream 104244 591522 ~ 591883 (+)
G266932 NA other upstream 421310 43038 ~ 44666 (+)
G267432 NA other downstream 295005 782283 ~ 782879 (+)
G267577 NA other downstream 594875 1082153 ~ 1082655 (+)
G268525 NA other downstream 1751881 2239159 ~ 2239998 (+)
G268805 NA other downstream 2121629 2608907 ~ 2638205 (+)
G269181 NA other downstream 2971679 3458957 ~ 3462928 (+)

Expression


Co-expression Network