CI01000065_00563411_00579174 (MBPB, MBP)



Basic Information


Item Value
gene id CI01000065_00563411_00579174
gene name MBPB, MBP
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 562848 ~ 580083 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000065_00563411_00579174.mRNA
AGACAGCGTAGTAAACATACGCGTGAGGTTTCATCGCCCCACCCCACTGAATAACACGGAGCTTCAGAGAAGCAGGAAGTGCTGGTGGATCATCATCCGAACCACATGCTGCTGAAACACAAAAACAGAGCCTACAACATTGTATTTTGCGCCGATGAGGATTTTTTGATGAACTGCTGAGGCGAGCAGCCGAAACCTGCAATCTACACATCGCGTGGACGCGTTTGGGCAAACAAGTACGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCGCGTCAAATCACGACATCTTATTTGCTGTCGTCGCCTTTGCTTGAAACAAGCTGTATCAGTGCTCAGTGTGCTTCCTCGCTGATCAAATGGTGTAGTTATTTCTGTCAGGACTGGACTCCTGTATTATGTAACCTGTCAGGGTTTGGTCACTTCCAGATGTGATGATGTTACTGTTAGCCACTGCATTTCTGTCATTGTAACTCAACATTGTCACAGCGCGACATTCACGTGAACAGCGAGTAACGTTATTTGTTTTTCCGTGTCGCCAGAGGCCCCGATTTGAGGCAAAAATATCTAGGTGATGTCACTGTTCATTTGCATAAACTACACTAAACTAGCGCGTGTCGAGCAGATGTGAGGAGCAAGCACATTGTGAAAGTAATCTTTTTAGTTATTATTGTTTTGTGTTGACAGATTATTAACAGGAAGGCATACTTTTCCCCATCGAGTGCCCTCCAGATGTTTTCAACCTGCGAACAATTGCAGAACTTAAAAGATGTAAAAGCTTCAAGGCTTTTATAATAATCGGATATTGCTGAAGACACTTTAGTCTAAGGTTTAAGGTGAATATACGACTGTGAACTGTCAGTTTCCGCGTTTTGGTTCTTGTTCAGATGGAAACTAATGTGGGCGAATGGGCTGCAGTCGATGTGTTGGGAAACTACAGGCGGTGTCTACACTCGATAGTGGTCGAGTGAGCATGGGCCAGCATCTTGGAAAACGTGAACCACTTTCTGTTTCCAAGGGATCCTCGACAGTATCTGATCACATGTCAGCAGCCTCGCCAGAGGCTCAGGATGAGGTGTTTGGGTTTATAACCACTGAAAAATTGTGTCCAATGAGCTGCTCAATCTCTGAAACCTTTATGAGAGGGGGAGGCGGACCTCAACCAGAACAATGGCTGCTCCAGCAAGAGTCCAGCGGTGACCGACTCCATGAACGCCGCAGTAGATCACAGCAGCTGGAAGCAGCCGAGCACAGCCGACCCCGACACCTCAGAGCCCCGCCCACACTTGGTCCGCCTCTTTTCTCGAGATGCCCCGGGCCGCGAGGACAACACCTTCAAGGACCGCCCCTCGGAGTCGGACGAGCTTCAGACCATCCAGGAGCACGGCGGCAGTGGCGGCTCAGACAAACACTTGCTATGGCGTCCGCAAGCTCTTCCCAGTCAACCTTCAGGCTGGGCCGCAGCAAGAAGAGCCCTACTGTCATGGATCAGATCGGAAAGTTCTTCGGAGGGGATAAAAAGAAGAAGGGAAAGCAAATGACACAGCAAGTGAAAAGTTCAGCAAATATGGTACAGTACCTGTGGGATATTGAGTGGATTTCCACATATCTTTTCATACAGTATATGCGACTGGTGAATATCATATATTTTAGAATCCAGTCATCTTGTAAGGAAGCGCCTCAGGGTTTTTCACGGTACGGACAGAGGCTTGGTTTCTAAAATGAATTTGCATAGTTTTGGAAATGATCTTTAATTATCTTTATTATTGCGTGTGTAATTATGCAATTTCTAGAGCCTTAAATTTTAAGACAAAAAAGAGGGAGGTGAATCATTTTTCCTTCTAAAACAAAGATATTTAAGCTGTTTGGGAAACTTTTTGAAATTAGACCTCTGTGATGTGTGTGAGTTTATAGTTGTGACCTTATTTTTAAAGTGCCAAATGATGGTTAAAGCTGATGTAACAGAATTACTGACATTGATTATAGTTCATGTTTATGTGGAGAAATAATGTGAGCGAGACTGAGATTGTGATGGTTCCAGCTGTATAATAGTTTGTCTGTTGATGTCTTAAATACGCCTCAGGGGAGCTCGTCTCATCTCGTCTCGTCTCTCTCTCTGTAACAGTGTGATCTTTAAGTGTTAATGCCGCACTATTAACCCTACGGATTGTGTTTCGTTTGTAACAAGAGCTTGTGTAACCTACCTATTCCCGAACAACCCTGACGCTGTTCCCTCGCCTGATCCTGTCTTGAGCTTTTTCACATTTGCTTGATTAAAATAAA

Function


symbol description
mbpb Predicted to be a structural constituent of myelin sheath. Located in myelin sheath and plasma membrane. Is expressed in nervous system and polster. Human ortholog(s) of this gene implicated in multiple sclerosis. Orthologous to human MBP (myelin basic protein).
mbp Enables calmodulin binding activity. Involved in several processes, including maintenance of blood-brain barrier; negative regulation of heterotypic cell-cell adhesion; and positive regulation of macromolecule metabolic process. Located in myelin sheath. Part of protein-containing complex. Implicated in multiple sclerosis.

GO:

id name namespace
GO:0043209 myelin sheath cellular_component

KEGG:

id description
K17269 MBP; myelin basic protein

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000065_00563411_00579174.mRNA False 2285 mRNA 0.45 7 562848 580083

Neighbor


gene id symbol gene type direction distance location
CI01000065_00444905_00447425 NA coding downstream 115423 444680 ~ 447425 (-)
CI01000065_00330696_00340165 NA coding downstream 222076 330592 ~ 340772 (-)
CI01000065_00253168_00255665 NA coding downstream 307138 252691 ~ 255710 (-)
CI01000065_00120723_00133111 MBOAT1 coding downstream 429737 120406 ~ 133111 (-)
CI01000065_00097164_00097583 NA coding downstream 465258 96904 ~ 97590 (-)
CI01000065_00622545_00624625 NA coding upstream 42040 622123 ~ 624657 (-)
CI01000065_00768127_00769942 NA coding upstream 187489 767572 ~ 770151 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 coding upstream 202653 782697 ~ 793467 (-)
CI01000065_00843437_00865598 FOXO3, FOXO6 coding upstream 263349 843432 ~ 865598 (-)
CI01000065_00869870_00870423 MED18 coding upstream 288355 868438 ~ 870423 (-)
G267739 NA non-coding downstream 13369 548000 ~ 549479 (-)
G267728 NA non-coding downstream 37264 524879 ~ 525584 (-)
G267722 NA non-coding downstream 50098 512513 ~ 512750 (-)
G267721 NA non-coding downstream 50680 511694 ~ 512168 (-)
G267411 NA non-coding downstream 58367 504275 ~ 504481 (-)
G267770 NA non-coding upstream 11459 591542 ~ 591749 (-)
G267771 NA non-coding upstream 14539 594622 ~ 598770 (-)
G267778 NA non-coding upstream 50121 630204 ~ 630439 (-)
G267781 NA non-coding upstream 53499 633582 ~ 637869 (-)
G267786 NA non-coding upstream 71466 651549 ~ 651778 (-)
CI01000065_00050903_00055774 NA other downstream 508461 50386 ~ 55774 (-)
G267024 NA other downstream 516761 43039 ~ 46087 (-)
G269348 NA other upstream 2728360 3304357 ~ 3312480 (-)
G269679 NA other upstream 3193797 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 3213040 3793123 ~ 3806693 (-)

Expression



Co-expression Network