CI01000065_00581819_00588773


Basic Information

Item Value
gene id CI01000065_00581819_00588773
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 580875 ~ 588779 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_00581819_00588773.mRNA
GTATAAAAGGCATAAAAGTAGCAAAAACAAATTGAAATACTTATGTAAAGTACAAATTTGGGGAAAAAGTACTCAAGTGAATTAACAAAGTATTTACTTCACACATCTGAATATGTAGGGGATTCCCACTTTAGAAGATGCAGTCCTGTGGCGGCGATGGACGAAGTGCACAAATCAAGTACAGATACCCTATTAAAATATGACTCCCATCAAAGTACTCATTTTCAGTTTTACTTGAGTAAAAGCACAAAAGTACTCGACTTTAATGTACTTAAGTATTAAAAGTAAAAAGTACAGATCAATGAAACATATATTTATTATATTATTTATATATTATTAGCCAGCACTACTCAGTAGTCAGTACTAATAAGAAAGATTAGTGCCTTGAATTAATGTTGCAAATAAACAAACTTTTTTATTTTATTACCAACACTTTTTACACACTATCAAAACATTTGATATACTAATATTTGGTATACTTTACTAAATATCAATTTAAGTTACTGATAATTCACTGATAAATTATAACATCAATATGCATAGATTTTTTTTGTTGGTTTTCAATTGGGATAATAAGTAAACAAACATCTTCCAAATGTCTCATGCCAGTGTCATATTGGTTTGATAAAAGTCTGATGTCATGCCAACAAAATCCATACTAACCGTATGTTATCAACTTTCTTTAAAGTTGGTGTTGGAGCCATTTTATTGAATTGTAATTTTTGTTTGTGACACTAGAGGGCACGTGAGTATTTTGAGTATATTTAAACCAAGTGCTAATGAGATACAGGTGGCGCAATAGAAGGTCAAACAAACTTTTTGACCATGCCATGTAGAGCATGCAGCGTATCGTGCAGGACTGTGCTTGTGAATGGTATTTTTGTTTATTAAATAGAAAATCGAAGTTAAGTTTGAAGTTTTATTTTTATTATTTGCAATGCCAAATGGACAATAAATGGACTGGCATATCCGACTTTATTCCAATGGTATGGACAATAACTTTATTTATTCAAGGCAAAGCACGCGTCCTGCGTCCCTACAAGTTTAAGTCAAAAAGTTCGACAGAAGGAGCCTGGCGTTTCAAATGTAGAAACAAGGGTCAGCAGTCGCACTTCAAGCCACAAAAGCAGCCGCCACAGTTCACGCTCCAGGAAAAAACATATAACAAGGGTGATTGCTTGTATTTTCTTGAAAGGTACACAAGAGGGCCCCCAAGAGAAATTGTGCGAAGCTGTATGAATATGGCACCTGAAAGAGGTTATGATACAGCTAAAGCTATGCTTAAACAGCAGTTTGGAGAAGATTATTTTGTTTCTGCTGCATATATGGAGAAGGTGCTTGAATGGCCTATGATCAGGTATGAAGATATCACAGCTCTTCAAGATTATGCACTCTTTTTACATCCAATATTTGGGTCCATTCAAAATGTAGAGATGAGAACAATTGGTAAACCAAAAGATGTCTTCAAATGGAAATCACAATCCCAGTCAAAGCCTAAGTTGAAAGGGGACAATTTTTCTACCAGTGTCACCAACATTGACAAAACCCTTGTTGGTAAAATCCAAAAAGCAAATGCTGAGCAGTCAATCAGCCAATTCAAGTGTAACTCCACCACCTGTTTGTTCTGCTCACAAAGTCATTCTTTGGAGCAATGTAAAGAGTTTGTAAAGAAGAAGCACAGGGAAAAGTTTGATGAGGAAGCTTCACCTGAATGGATGAAAGACAAAAATTTGTTTGCTTACAATGAGTCCCAAAACAACAGTCTCAAACTATGTGGTAAACAACTTGGAGATTTCAAGTCTTTCTGGAGAACTGCAAATGACAATCAGCACTGCTTTAATAAAGAGGAAATTAACACTGTGCATAAGAGCTTCTACATGGATGATTGCCTAAAAAGCTTACCTACAGAGTATGAGGTGATTCAGATGGTCATAGACCTGAGCACTCTATCTCACACAGGGGGCTTCCATCTAACTCAGTGGGTCAGTAACAGCTGTGAGGTCTTGCAGTCCATTGCAGAACGAGATAGATCCAAGAACCTTAATGAACTCAAATTGGATCGAGACCAAGTACCAGTGGAAGGGGCCTTAGGACTTCAATGGTGCGTACAGACTGACACCTTCAATTTCAAAACTGTTTGCAAAGAAAGAATGCCAACTAGATGTGGCATATTGTCAGTGATTAGTTCAGTGTATGATCCTTTAGGATATCTTGCACCACTGACACTTCCAGTCAAACTTATCCTCCAACTCAAGACAGCAGTTGCATGGATCTTGAAAGTAAAGAAAGTTCTACTTGAAGTAAGTCGCCAAAGAAAACAATTGATCACTTTAAGTGACTTGGAACAGAGGTTGCAACGAGCCAAAATTTCATTTGTTGGACAGTGCTTGTCTCCAGATGACCTTTCCGAGGCGGAAAATGCTATTATTCAGTTCTGTCAATGGGAAAAGTTTAGCATGGAAATTTCACCACTGAAATCTGGAAGATCTGAAATCAAAAAAGACAGTTCTATTCACAAGTTAAGTCCCATTCTACAAGATGGATTACTAAGAATTGAGAGAAATATTGGATTACCCATGCCAATGCAACCGCCAGAAAAATTCTTTCAAGCTGTACCTTCTGCAAACGACACAAAGAGAGGACAAGTATGTCATTTGAGGTCCGACAATGGAACAAATTTTACTAGCACAGAAAAAGAATTGAAAAGAGCACTTGCAGAGTTGAATCAAAATAAAATCACAAAGGTTTTAGCACACAAAGGAATTAAAAGGACTTTTAATCCACCTGCAGCTTCACATCATAGTGGCTCATGGGAGCGCATCATCAGAATGGTCAGAAAGGTGTTGTCCTCCGTTCTGAATCAACAAACACTAGATGATGAAGGATTACACACTGTTCTGTGTGAAGCTGAGGCAATTCTCAATGACCGACCCATCACCAAAATGTCTGAAGATCCAAATGATCTTGAAGCACTTACCCCCTATCATCATCTTACATTGAAGAGAAAACCAATCTATCCTCCTGAGCTTTTTGAGAAATCAGATCAGTATGAAAGGCAAAAATGGACTAAAGAGAGATGTAATCTTATGCCTGGTGATATTGTACTCATTGCAGATTCTACAGCTCCACACAATTCTTGGACTCTTGGAAGAGTACTAGAGACTTTCCCAGATAAAAAGGGTTTGGTTAGATCAGTACGAATTCAAACCAAAACAAACACAATATTGGAATTGACACCTAAGTTGGGTATTGAGCAATCTCTGGTGTTTATTCCAACCAATTTGCAATGCCTGTCCAAAGTTGGAGTTTGACATCAA

Function

NR:

description
Nattectin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_00581819_00588773.mRNA True 3317 mRNA 0.37 10 580875 588779

Neighbor

gene id symbol gene type direction distance location
CI01000065_00517483_00553268 ZNF236 coding upstream 27137 517483 ~ 553738 (+)
CI01000065_00506921_00509678 NA coding upstream 70618 506921 ~ 510257 (+)
CI01000065_00491304_00503042 NA coding upstream 77417 491148 ~ 503458 (+)
CI01000065_00466096_00487259 NA coding upstream 93597 465976 ~ 487278 (+)
CI01000065_00408239_00434714 NA coding upstream 145468 408148 ~ 435407 (+)
CI01000065_00605004_00618190 ARHGEF2 coding downstream 15632 604411 ~ 619124 (+)
CI01000065_00625575_00629127 EAF1 coding downstream 36796 625575 ~ 629294 (+)
CI01000065_00633526_00695106 BBS9 coding downstream 44747 633526 ~ 695106 (+)
CI01000065_00750437_00764088 BMPER coding downstream 161658 750437 ~ 764297 (+)
CI01000065_00800809_00808759 SRI coding downstream 211097 799876 ~ 808874 (+)
G267441 NA non-coding upstream 68743 511690 ~ 512132 (+)
G267438 NA non-coding upstream 72462 508182 ~ 508413 (+)
G267336 NA non-coding upstream 144275 436262 ~ 436600 (+)
G267248 NA non-coding upstream 213207 367465 ~ 367668 (+)
G267454 NA non-coding downstream 2236 591015 ~ 591219 (+)
G267455 NA non-coding downstream 2743 591522 ~ 591883 (+)
G267457 NA non-coding downstream 42457 631236 ~ 631444 (+)
G267550 NA non-coding downstream 403503 992282 ~ 992724 (+)
G267551 NA non-coding downstream 407103 995882 ~ 996173 (+)
G266932 NA other upstream 536209 43038 ~ 44666 (+)
G267432 NA other downstream 193504 782283 ~ 782879 (+)
G267577 NA other downstream 493374 1082153 ~ 1082655 (+)
G268525 NA other downstream 1650380 2239159 ~ 2239998 (+)
G268805 NA other downstream 2020128 2608907 ~ 2638205 (+)
G269181 NA other downstream 2870178 3458957 ~ 3462928 (+)

Expression


Co-expression Network