XLOC_010384


Basic Information

Item Value
gene id XLOC_010384
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 3348006 ~ 3348709 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021779
TGAGCAAATATTTTACCCTATATTGTATATTAGACTTTCACTTAGTCCCCTTGCTTGTCTTTGCTGGCAGGAGCGGACTGCAGTCGTAACTGGTTTTGGAAGTCTTCGTTGGGGGTGTAAAGTCATCCTGCCGTGGGTCGATCCTGCAGCTGATGCGCCTCCTGGAGGAATCCTCACCAGACGCCACATCACATTAAGGGTTCGGAGGtcacggaagaaagtgaagagctgAAGAAATGAGGAGCCAGATCCAGATCCggcttgttccggcacaaattaagcctttCCTACATgccttttagatattttttaacgcgggaaatacatttgttttactttatggttgttttaaaagttttaaaacacgtactgtatattttataaacatgCCCACATAtattaag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021779 True 404 lncRNA 0.43 2 3348006 3348709

Neighbor

gene id symbol gene type direction distance location
XLOC_010383 csf3r coding downstream 220257 3103182 ~ 3127749 (-)
XLOC_010382 cdcp1a coding downstream 477484 2847565 ~ 2870522 (-)
XLOC_010381 acot22 coding downstream 529836 2814233 ~ 2818170 (-)
XLOC_010380 NA coding downstream 535998 2809717 ~ 2812008 (-)
XLOC_010379 tgfb2 coding downstream 540479 2745006 ~ 2807527 (-)
XLOC_010385 GRIK3 coding upstream 115018 3463727 ~ 3678976 (-)
XLOC_010386 NA coding upstream 436165 3784874 ~ 3796633 (-)
XLOC_010387 si:ch211-175f12.2 coding upstream 662258 4010967 ~ 4031386 (-)
XLOC_010388 NA coding upstream 830327 4179036 ~ 4179967 (-)
XLOC_010389 rrp15 coding upstream 848223 4196932 ~ 4203022 (-)
XLOC_010626 CR392024.2 misc upstream 17546403 20895112 ~ 20895175 (-)
XLOC_010378 CU929110.1 non-coding downstream 612207 2735676 ~ 2735799 (-)
XLOC_010372 NA non-coding downstream 1398937 1948025 ~ 1949069 (-)
XLOC_010369 NA non-coding downstream 1995000 1350971 ~ 1353006 (-)
XLOC_010368 NA non-coding downstream 2129436 1204142 ~ 1218570 (-)
XLOC_010390 CU469524.1 non-coding upstream 861768 4210477 ~ 4211935 (-)
XLOC_010391 CU469524.2 non-coding upstream 886018 4234727 ~ 4267736 (-)
XLOC_010394 BX927222.1 non-coding upstream 1178772 4527481 ~ 4527647 (-)

Expression


Co-expression Network