CI01000065_00768127_00769942


Basic Information

Item Value
gene id CI01000065_00768127_00769942
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 767572 ~ 770151 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_00768127_00769942.mRNA
ATCATCCTATCTGAGTCTCTGTAACACCTTTTGAGAGTAACTGTCTATTTTTTTTTCTTTTTTTTTTTTTCTTCTTGTTTATTCAGCACATCACAATTAAGCAGAGAGGGCAAGAGCCTCAGCCTCAACGCTGCCATGCAGATGCTACTTTATTCACTTGCCCTTTCTGCACAACTGATGCATGTAAGCCAAGAAAATATCATCAAATAATGGCCCATATAGCTGGACATAAACTGAGCGCGGTTGAATATGGAGATGATGTTATATACAGCTGTAACAGCTGTGGTGAAAAGGCCAGACATTTTCACTGCTGCCAGTGTCCACAGACCTACTTCAATCAAGGTGCTCTAAAGAGGCATCTTTGCAACACTCATCCTATAGCTACTTGCGCTCCAGAACCACAACCTGTAGGTCGTCCACTACAAGAACCTCCTTTGCAGCAACCAGCACCTCGTCCACTGGAATTAGCAGCTCAGCGAGTGATTGTTAAAAGAAAGCAAATCTCTGTGCAGTGTCCTCACTGCAGGGTCAATCTGAATTCCAAAAATTTAAAGATGCACATTAAGCGGAAACATCATGAAGCCATGCATCCTGTAACTCCAACTTGGGATTCATCCCACAAGGTTATCTGTGACATTGATATTTGTAAAAGCTGTGTTGAAACGGCACCAAGGAGTGAACTTTTGGTTACACAATGTGTGTCTCTAAGCTCAGTAGACTACTCCTGTGCTGCTGAACCTAGTGAAGATTTATCAGAGGACATGTTGACTGAGATGGAGTAAAAACCATTTGGGGGAAAGAAAAACAATGTTTTAAGTAGCAAAATTAGGATAACGGTAAAGGTGCCACATTTACTAGCCTTGTTACCATTGGAGGCCCCAACTACATATATAAAGGTGGCACATTACTGTCTTGGTGAATTACAATGTCACTGTAAACTGTTGGTACTGCCCTTGTAGCAAAGGTAGAAAATCATGTCTGTACCAGAGTATTGAAAAGTGGAGTCTCTTTCAAATGAAGAAGCAGCTCTTCAAAAACCAAAAGCAAAGGAAGGGATTGAATCAGCACGAGGACCTGTCTAGCCAACAGTGGTAATATCCTCCACAGCAGTCGTTCCAAAAATGGTTGCCCGCAACTGGCTAGGAGAAGAAAAACTGAGACATCTCAGCCCAAAAGAAAAACCGATTCTGACTCACAACGAACTGGCACTACAAATAGATGATCCTGCAGATATCAGTGGACACTGCCACCTCCTTGCTAGTGTGCAATATGTTAATGAAGAGTTTATTGCTGTTACAAGGGCGGGCATGGGGGTGTTTTAAATGAAAAAGATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_00768127_00769942.mRNA True 1337 mRNA 0.42 2 767572 770151

Neighbor

gene id symbol gene type direction distance location
CI01000065_00622545_00624625 NA coding downstream 142947 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP coding downstream 187489 562848 ~ 580083 (-)
CI01000065_00444905_00447425 NA coding downstream 320147 444680 ~ 447425 (-)
CI01000065_00330696_00340165 NA coding downstream 426800 330592 ~ 340772 (-)
CI01000065_00253168_00255665 NA coding downstream 511862 252691 ~ 255710 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 coding upstream 12585 782697 ~ 793467 (-)
CI01000065_00843437_00865598 FOXO3, FOXO6 coding upstream 73281 843432 ~ 865598 (-)
CI01000065_00869870_00870423 MED18 coding upstream 98287 868438 ~ 870423 (-)
CI01000065_00906591_00915144 PRDM1, PRDM1A coding upstream 135241 905392 ~ 915144 (-)
CI01000065_01017206_01031155 NA coding upstream 246545 1016696 ~ 1031678 (-)
G267791 NA non-coding downstream 100669 666609 ~ 666903 (-)
G267790 NA non-coding downstream 105889 661271 ~ 661683 (-)
G267789 NA non-coding downstream 106724 657131 ~ 660848 (-)
G267788 NA non-coding downstream 111938 655416 ~ 655634 (-)
G267786 NA non-coding downstream 115794 651549 ~ 651778 (-)
G267850 NA non-coding upstream 26105 796256 ~ 796967 (-)
G267852 NA non-coding upstream 27875 798026 ~ 798242 (-)
G267853 NA non-coding upstream 28704 798855 ~ 799073 (-)
G267752 NA non-coding upstream 40611 810762 ~ 811315 (-)
G267856 NA non-coding upstream 55232 825383 ~ 986069 (-)
CI01000065_00050903_00055774 NA other downstream 713185 50386 ~ 55774 (-)
G267024 NA other downstream 721485 43039 ~ 46087 (-)
G269348 NA other upstream 2538292 3304357 ~ 3312480 (-)
G269679 NA other upstream 3003729 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 3022972 3793123 ~ 3806693 (-)

Expression


Co-expression Network