CI01000065_01037474_01041412


Basic Information

Item Value
gene id CI01000065_01037474_01041412
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1037164 ~ 1041412 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_01037474_01041412.mRNA
AGCCAATGTTACAGCGGTTATACGCTCAGTCGCCGTGTCTGGTGCATCCTGACCGCCTGCTGTGAACAGGGGACAGATGAGGTGAAGAAGCTTCAAGACAGGGACGGTGAGACAGGGAGAAGCAGCTCAGAGTTGCAGAAACAGGCTAGCACATTTTCATATTTCATAAGAGAGACAAGTGAAGAAGTGCAGGCAGGCAAGCAGGAAGCTGAAACCAACCAGGCTAACCCGAAGCTCACTGCAGTGCAGCAGCTCACCAACAAAACGCTACGGTTCCAAGAAAAGTGGTACTGTGAATTTCCTTGGCTCCACTACAGTCCAGGAGTCAATGGAATCCTATGTTTTTTTTTCTGTGCTCAAGCTTTTGGGCATGAAAATTCAAATTTGGCCAAGAATGCAGATCCAACATTTGTCAAAACTGGTTTCCGAAACTGCTCTTGGCACGCCAGGGAGCTGCTCTTAGGGGCCATGCAGCTGAAGAGGGTCTTCTTGGGGTTTTACGAAGTCTCAAGCACAACTGGGGAAAACCTAGCAAAAGTTTCCACAGATGTGTTGTTGTGCTTGAATCTTCTGCTGTCTGGTCTGCGTGGGCAAACATATGATGGAGCGGCGAACATGTCAGGCAACAGAAAGGGAGCACAGGCCAGGATGAGGGAGATGCAGCTGCTGGCTTTGTATGTACACTGTGGCGCTCACTGTGCAAATCTGGACATGGTCCAAGCAGATGCCTCAAACACTGGTGTGACAGAAAGAGGGCTGCTGGAGAGATTTGGAAAAGGTACCACAGTTTTAGGACTCATGATGGCCACTGAAGTTATCCAGGAGCTGGAGTGCCTTAATTGCACACTGCAGAAACAGAAACAGTGTTTGGTGGACATCCAGCTGAAGGAGAGGTTTGATCAGGGTGGTCTGAAAACACCAGTGAAGCTGGAGGAAGCCCTCCTAACTGGGCAGATGGACACTGCTGTGGTGGACCAGTATTCTGAATTAAACCAACGGTCACTGAAGGTGCAGCTGAACATTTTTAAGCTCCAGTACATAAACACAAACACTTCAGAGGCCGCAACTATTCAGAGGAATCAGCTGCCTGAAGTCCGTGGCCTTTTCAATCAAGTGGAAGCACTTGTATGACTTCTTATGGCTGTTCCTACTGCCTCTGCTGAAGCAGAGAGGAGCTTCAGTGCTCTGAGGAGGTTGAAGATCTGGCTGAGAAGCACAATGTGTCAGATTCGCATTAACAATGTAGCAGTCTGTCACATTCACAAAGAAATACTGGATAAAGTCAGCAAGGAAAACATTTGCCAGGAGTTTATCCTTGCGAATGAGTACAGGAAGCATGTGTTTGGAGGAGACAGGACAGTATAGAAGGGTGGATTAGGATGCATGGAGAGATGGGATTGAATGGATAGATGGAGGACAATGAAAAGTTCTTTATATTAAA

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_01037474_01041412.mRNA True 1441 mRNA 0.48 7 1037164 1041412

Neighbor

gene id symbol gene type direction distance location
CI01000065_01017206_01031155 NA coding downstream 5486 1016696 ~ 1031678 (-)
CI01000065_00906591_00915144 PRDM1, PRDM1A coding downstream 122020 905392 ~ 915144 (-)
CI01000065_00869870_00870423 MED18 coding downstream 166741 868438 ~ 870423 (-)
CI01000065_00843437_00865598 FOXO3, FOXO6 coding downstream 171566 843432 ~ 865598 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 coding downstream 243697 782697 ~ 793467 (-)
CI01000065_01103779_01119916 SIM1, SIM1A coding upstream 62132 1103544 ~ 1120757 (-)
CI01000065_01148241_01167007 ASCC3 coding upstream 106462 1147874 ~ 1167007 (-)
CI01000065_01173590_01277821 ASCC3 coding upstream 132103 1173515 ~ 1277821 (-)
CI01000065_01297837_01321136 NA coding upstream 256387 1297799 ~ 1321136 (-)
CI01000065_01373412_01382125 NA coding upstream 331862 1373274 ~ 1382947 (-)
G267926 NA non-coding downstream 812 1036089 ~ 1036352 (-)
G267856 NA non-coding downstream 51095 825383 ~ 986069 (-)
G267863 NA non-coding downstream 157158 877790 ~ 880006 (-)
G267752 NA non-coding downstream 225849 810762 ~ 811315 (-)
G267853 NA non-coding downstream 238091 798855 ~ 799073 (-)
G267944 NA non-coding upstream 37670 1079082 ~ 1079359 (-)
G267946 NA non-coding upstream 41586 1082998 ~ 1083361 (-)
G267997 NA non-coding upstream 289658 1331070 ~ 1331343 (-)
G268087 NA non-coding upstream 324564 1365976 ~ 1366304 (-)
CI01000065_00622545_00624625 NA other downstream 412507 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 457137 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 982777 50386 ~ 55774 (-)
G267024 NA other downstream 991077 43039 ~ 46087 (-)
G269348 NA other upstream 2267031 3304357 ~ 3312480 (-)
G269679 NA other upstream 2732468 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 2751711 3793123 ~ 3806693 (-)

Expression


Co-expression Network