CI01000065_01076737_01078446


Basic Information

Item Value
gene id CI01000065_01076737_01078446
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1076737 ~ 1079588 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_01076737_01078446.mRNA
ATGAAATACAGATTCACATGCATCACACTTAATAACAAACCACGTCCACAGTGTGTTGTATGTTCTGAGGTCCTTGCAAATGACAGTTTGAAACCTGTGAAACTAATACGTCAATTACAAACCAAACACCCAACGTTAAAAGATAAACCGGTTGACTTTTTTTGCCGTAAAGAATCAGGATTAATGAATCAAAAACAAACTATGACCAACCAAACCACTGTGGCAGCCAACACACTTACTGCTTCATATGAGGTAGCGTATTTAGTTGCCAAGGCCAAAAAGCCTCATACAATTGCAGAGAGCCTCATTCGTCCAGCAGCAATGGCTATCTGTAGAAATATGTTTGGAAATAAATTTGCCAGTGAAGTTGAACAAATTCCATTATCAGACAACACTATGAGCCGCCGTATCGCTGAGATGGCTACCAACATCAAATCAATGGAAAAAACATGCACAGATAGAGATATTTTTGAAAATCTCAATGGTAAACTGGAAGAACTTGGTCTTTGTTGGGACAATTGTGTTGGTGTGTGCACAGACGGAGCGGGATCCATTTTAGGGAAAAACAAAGGGCTCGCTGCTTTGGGAGATCCTTGCAGCAAAACCCTTCCTGCAGAGTTAAACGCAGTGCTTCAAACAGCAACACAAGTTGTAAATTTCATCAAGACTCGCCCCATAAAATCAAGACTGTTTGCTCCGTTGTGCAAAGAAATGGGGTCAGAATATGAGTCACTACTCCTGCACATGGAGGGCCCGAATTCAAACCTACTAACAATGTCTGATAAAATTTTGGGGTTTGTGAGGAAACTGGAGCAATGGAGAGGGCAGGTTGATGGGGGTAATGTAGACATGTTCCCAACCTTGGATGAATTTCTCACGGAAAATGAGCTTAACTGGGATGTCACAAAAAAAGAAATTTCTCTCCATCTGCAAGCCCTGTCTGCACATTTCAATAAGTATTTTCCAGAGCAGCATAGTTGGAACCAGTACGACTGGGTTCGTAACCCCTTCATCGAAAGCGCAGTGAGTCTGTCATCAAATCAGCAGGATGCCCTTCTGGACCTTTCAAGTGACCGAACTTTGAAGACACTGTTCGACTCATCAAACTGTCAGAATTCTGGCTGTCAGTGGAGACTCGCGAGACTTGCAATTAATGTACTTTTGCCCTTTGCCTCAACTTGGCTCTGCGAAGCAACATTTTCTGCATTAACTTTCATCAAAAGCAAGTATCACTCATGCTTACTGACAGTGGACGATGATTTACGGATAGCTGTGTCGGGTATCCAACCACGGATTGGATCTCAGAAACAGACTCAGCCATCACATTGAATTAGGTGAGCTGGTTTTATACAGTGCTCAGCGTAAATGAGTACACCCCCTTAGAAAAGTAACATTTTAAACTATATCCCAATGAACACAAAATCAATTTCCAAAATGATGACAAGACTAAGTTTAATATAACATCTGTTTAACTTATAATATAAAAGTAAGGTTAATAATATAACTTAGATTACACATTTTTCAGTTTTACTCAAATTAGGGTGATGCAAAAATGAGTACACCCCACAACAAAAACTACTACATCTAGTACTTTGTATGGCCTCCATGATTTTTAATGACAGCACCAAGTCTTCTAGGCATGGAAGGAACAAGTTGGCGACATTTTGCAAGATCTATCTTTTTCCATTCTTCAAGAATGAGCTCTTTTAGAGACTGGATGCTGGATGGAGAGTGATGCTCAACTTGTCTCTTCAGAATTCCCCATAGGTGTTCGATCGGGTTCAGATCAGGAGCCACTGAATCACTTTCACCCTGTTCTTCTTCAGAAATCCAACAGTGGCCTTAGATGTGTGTTTAGGTTCATTGTCATGTTGGAAAAGTGCACGGAGTGATGGTAGCATCTTCTCTTTCAGTATAGAGCAGTACACCTGTGAATTCATGATGACATCAATGAAATGCAGCTCCCCGACACCAGCAGCACTCATGCAGCCCCACATAAGGACAGTGCCACCACCATGTTTCACTGTAGGCACCATGCATTTCTCTTTGTATTCCTCACCTTTGCGACACCATACAGTTTTGAAGCCATCAGTTCCAAAAACATTTATCTTGGTCTCATCACTCCAGAGTATAGAGTCCCAGTAGTCTTCATCTTTGTCAGCATGGGCCCTGGCAAACTCTAGGCGGGCTTTTTTGTGCCTGGGCTTTAGGAAAGGCTTCTTTCGTGGATGGCACCCATGCATGCCATCAGTGGGGTGTACTCATTTTGTATCACCCTAATTAAAGTTATATTATTAACCTTACTTTCATGTTATAAGTTAAACAGGTGTTATATAAAACTTTGTCTTGTCAACATTTTGGAAATTGTTTTGTGTTCATTGAGATATTGTTTAAAATGTTACTTTTCAAAGTGTGTGTACTCATTTATGCTGAGCACTGTATATATTTTATGTAATGTTTGCAATGTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_01076737_01078446.mRNA True 2471 mRNA 0.41 4 1076737 1079588

Neighbor

gene id symbol gene type direction distance location
CI01000065_00873636_00877487 ATG5 coding upstream 199250 873636 ~ 877487 (+)
CI01000065_00800809_00808759 SRI coding upstream 267863 799876 ~ 808874 (+)
CI01000065_00750437_00764088 BMPER coding upstream 312440 750437 ~ 764297 (+)
CI01000065_00633526_00695106 BBS9 coding upstream 381631 633526 ~ 695106 (+)
CI01000065_00625575_00629127 EAF1 coding upstream 447443 625575 ~ 629294 (+)
CI01000065_01452148_01608735 GRIK2 coding downstream 372560 1452148 ~ 1608735 (+)
CI01000065_01867964_01868983 NA coding downstream 788200 1867788 ~ 1869813 (+)
CI01000065_01938179_01949512 NA coding downstream 858497 1938085 ~ 1950751 (+)
CI01000065_02222213_02282352 NA coding downstream 1142441 2222029 ~ 2282432 (+)
CI01000065_02442834_02444552 NA coding downstream 1362071 2441659 ~ 2445951 (+)
G267574 NA non-coding upstream 4683 1071804 ~ 1072054 (+)
G267573 NA non-coding upstream 6519 1069831 ~ 1070218 (+)
G267565 NA non-coding upstream 33867 1042464 ~ 1042870 (+)
G267557 NA non-coding upstream 44961 1017850 ~ 1031776 (+)
G267551 NA non-coding upstream 80564 995882 ~ 996173 (+)
G267561 NA non-coding downstream 43715 1123303 ~ 1124325 (+)
G268021 NA non-coding downstream 287641 1367229 ~ 1416137 (+)
G268022 NA non-coding downstream 293012 1372600 ~ 1423535 (+)
G268017 NA non-coding downstream 295762 1375350 ~ 1400757 (+)
G268016 NA non-coding downstream 325206 1404794 ~ 1412241 (+)
G267432 NA other upstream 293858 782283 ~ 782879 (+)
G266932 NA other upstream 1032071 43038 ~ 44666 (+)
G267577 NA other downstream 2565 1082153 ~ 1082655 (+)
G268525 NA other downstream 1159571 2239159 ~ 2239998 (+)
G268805 NA other downstream 1529319 2608907 ~ 2638205 (+)
G269181 NA other downstream 2379369 3458957 ~ 3462928 (+)
G269225 NA other downstream 2473216 3552804 ~ 3553214 (+)

Expression


Co-expression Network