CI01000065_01297837_01321136



Basic Information


Item Value
gene id CI01000065_01297837_01321136
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 1297799 ~ 1321136 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000065_01297837_01321136.mRNA
ACCAAGCGCCTGAAACGGCAGGAAATATTTGCCCGAGACGGTCTAACATGGCAGAAGATTGTTCAGTTCTTCACACAACATCTGGAGAAGAAGGATCAGCCGGCGGCCACTCACGAGTTGAAGAGTATCCTCCAAGCAGCCAAACAGATCGTTGGTACGGATTTTGGGCAGGACACCATTGAAAGTGCTGGAGTCTTCTTGTTTAAAACATTCCACAACAAAGACAAGATCGGTCATGAGGAAACCAGGGCCATAAAACAGATGTTTGGACCTTTTCCGGCGTCTGCTGCCGAGTTGTCTTGTGCAGCTGTGGGTCGTTTAGTGGCCCAGATCGGAGAATCTCAGGTGGATGCTTTCATCCAAACACAGAGTTCTCTCAAGACGGTGAACCGCGGTTCTGTCTTCGGACGGAACATTGCTTTCTCATTTGACACGTATGTGCTGGATGCTCACGATACTGTGCCCTGGTCAGAGGGGACTGACATGGATCAGGCCATGGACTTTCACAGCCTCCTAAATAATCATGTTGGTGAGCGAAGGGCTGGAGCTGAGAGAGATGATGCTTACTCAGCGGAAGAACTGGAGCAGAGAAACGCAGACGGATCCATCCTGAGACAAGAGGTGGAGAAATACCTGAACGAGGGAAATATGGTATCGTCCAGTGCCGAAGAGCTCTCCACCTCTCTTTTTGAGATGCTTGCCTCCACAAAGAGTGATGACGAACTACAAAACGAGGAATCTGAAGGCTTTTCATGTAAACCATGTTCTGGTGTGATCTGTCTGCTTAAGTCTGAGCTGTTTGAGTTTCTAGGTCCTCAGGGGTTTGAGATGATCTCCATGCTCCTCCAGAGAAGGTCAGACATCGTGGACGCTCTGGTGTCCATCCCGTCGGATTGCCGACCTCACTTCATGTCAGGATTTACTGTACCTGCTCTCACACACATCAGAGATGGTGCTCACATTAACAACGACTCAAGTCACACTTGACCATTTTCTTGGAACATCACAACACAGTTTAGATTAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000065_01297837_01321136.mRNA True 1025 mRNA 0.49 5 1297799 1321136

Neighbor


gene id symbol gene type direction distance location
CI01000065_01173590_01277821 ASCC3 coding downstream 19978 1173515 ~ 1277821 (-)
CI01000065_01148241_01167007 ASCC3 coding downstream 130792 1147874 ~ 1167007 (-)
CI01000065_01103779_01119916 SIM1, SIM1A coding downstream 177042 1103544 ~ 1120757 (-)
CI01000065_01037474_01041412 NA coding downstream 256387 1037164 ~ 1041412 (-)
CI01000065_01017206_01031155 NA coding downstream 266121 1016696 ~ 1031678 (-)
CI01000065_01373412_01382125 NA coding upstream 52138 1373274 ~ 1382947 (-)
CI01000065_01911879_01931555 HACE1, HACE1.L coding upstream 590376 1911512 ~ 1931555 (-)
CI01000065_01955024_01969974 NA coding upstream 631642 1952778 ~ 1970223 (-)
CI01000065_01982908_01987337 NA coding upstream 661267 1982403 ~ 1987488 (-)
CI01000065_02288372_02357728 GRIK3 coding upstream 967236 2288372 ~ 2357728 (-)
G267946 NA non-coding downstream 214438 1082998 ~ 1083361 (-)
G267944 NA non-coding downstream 218440 1079082 ~ 1079359 (-)
G267926 NA non-coding downstream 261447 1036089 ~ 1036352 (-)
G267856 NA non-coding downstream 311730 825383 ~ 986069 (-)
G267997 NA non-coding upstream 9934 1331070 ~ 1331343 (-)
G268087 NA non-coding upstream 44840 1365976 ~ 1366304 (-)
G268095 NA non-coding upstream 130945 1452081 ~ 1463686 (-)
G268151 NA non-coding upstream 282326 1603462 ~ 1681220 (-)
G268237 NA non-coding upstream 436478 1757614 ~ 1757990 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 514138 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 673142 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 717772 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 1243412 50386 ~ 55774 (-)
G267024 NA other downstream 1251712 43039 ~ 46087 (-)
G269348 NA other upstream 1987307 3304357 ~ 3312480 (-)
G269679 NA other upstream 2452744 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 2471987 3793123 ~ 3806693 (-)

Expression



Co-expression Network