Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000065_02358877_02366169 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000065 |
| NCBI id | null |
| chromosome length | 4956624 |
| location | 2358853 ~ 2366169 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU304816 | True | 625 | lncRNA | 0.38 | 1 | 2360922 | 2361546 |
| CI01000065_02358877_02366169.mRNA | False | 471 | mRNA | 0.46 | 5 | 2358853 | 2366169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000065_02288372_02357728 | GRIK3 | coding | downstream | 1125 | 2288372 ~ 2357728 (-) |
| CI01000065_01982908_01987337 | NA | coding | downstream | 371365 | 1982403 ~ 1987488 (-) |
| CI01000065_01955024_01969974 | NA | coding | downstream | 388630 | 1952778 ~ 1970223 (-) |
| CI01000065_01911879_01931555 | HACE1, HACE1.L | coding | downstream | 427298 | 1911512 ~ 1931555 (-) |
| CI01000065_01373412_01382125 | NA | coding | downstream | 975906 | 1373274 ~ 1382947 (-) |
| CI01000065_02679973_02700843 | NA | coding | upstream | 313670 | 2679839 ~ 2701444 (-) |
| CI01000065_02820772_02829132 | NA | coding | upstream | 453543 | 2819712 ~ 2829132 (-) |
| CI01000065_02940142_02940429 | NA | coding | upstream | 573885 | 2940054 ~ 2940813 (-) |
| CI01000065_02979795_02989709 | BVES | coding | upstream | 611674 | 2977843 ~ 2989763 (-) |
| CI01000065_02992054_02993108 | POPDC3 | coding | upstream | 625646 | 2991815 ~ 2993167 (-) |
| G268701 | NA | non-coding | downstream | 98045 | 2260492 ~ 2260808 (-) |
| G268687 | NA | non-coding | downstream | 115428 | 2241130 ~ 2243425 (-) |
| G268679 | NA | non-coding | downstream | 118869 | 2239140 ~ 2239984 (-) |
| G268684 | NA | non-coding | downstream | 123582 | 2235053 ~ 2235271 (-) |
| G268680 | NA | non-coding | downstream | 131159 | 2227441 ~ 2227694 (-) |
| G268657 | NA | non-coding | upstream | 33158 | 2399327 ~ 2420933 (-) |
| G268751 | NA | non-coding | upstream | 171939 | 2538108 ~ 2538324 (-) |
| G268759 | NA | non-coding | upstream | 179937 | 2546106 ~ 2546464 (-) |
| G268790 | NA | non-coding | upstream | 226364 | 2592533 ~ 2592919 (-) |
| G268795 | NA | non-coding | upstream | 232422 | 2598591 ~ 2598992 (-) |
| CI01000065_00782736_00793467 | NT5C3A, NT5C3 | other | downstream | 1575192 | 782697 ~ 793467 (-) |
| CI01000065_00622545_00624625 | NA | other | downstream | 1734196 | 622123 ~ 624657 (-) |
| CI01000065_00563411_00579174 | MBPB, MBP | other | downstream | 1778826 | 562848 ~ 580083 (-) |
| CI01000065_00050903_00055774 | NA | other | downstream | 2304466 | 50386 ~ 55774 (-) |
| G267024 | NA | other | downstream | 2312766 | 43039 ~ 46087 (-) |
| G269348 | NA | other | upstream | 942274 | 3304357 ~ 3312480 (-) |
| G269679 | NA | other | upstream | 1407711 | 3773880 ~ 3774294 (-) |
| CI01000065_03794501_03806693 | VEGFAA, VEGFA | other | upstream | 1426954 | 3793123 ~ 3806693 (-) |
| G268836 | NA | non-coding | upstream | 231224 | 2676105 ~ 2676427 (-) |
