CI01000065_02442834_02444552


Basic Information

Item Value
gene id CI01000065_02442834_02444552
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 2441659 ~ 2445951 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_02442834_02444552.mRNA
GTATATATACTGAATCATCCTACATAAAGGTCATTTTTAAATAGCTCTCTAACATACTGCATAATTTCACATTATCTTTCTGTTCCAGAAATGTTGACATTTTGTATAAGAATATGTGAAACCGTCTCTCTAGGAAAAAGGCAAAAAAATATAAGTGACATATAACTGTGTGTGAGATTGATTAACTGGTCATAATGAAGCACTGTAACTCTTAGGTAGATAAAGGGATTGATTTTTCAATAAATCTTCCTCTGGCGCTGATTCTCTCATTTAAAGGCATTAAATTTATTCCATTAATCGTATTCTTGAACAACAGATGAGACAGCCTAAATGCACAAGCTTCTCTTAAAGAAATACCCAAAAGACACAACATTTATGAAGACGATGCGTATAAACTTCGAAAAATCTCATTCAATTGGCCCTTTCTGAAAGCCACACTACACAAGACAAATTCCTTAAAATTAGGATTTAAAAAAAGCACAAATCTCCTGAGAGTTAGTCATTATTTTTCAAGACATATGCACTACTCTGCAGTGACATTTGGATGCGATCCAGAGCTGTCCGTGCCAAAACTGGAGTGGATTCTGATAGGCTGCAGCTGCCCTGAACGATATTGAAAGGGTTGAGTGACAGCACTGAATCCAAACTAGACTGAAAAGTCAAGCTGGGTATTGAAAACCCATTGAGTTTGACCTCAAAGGCTGTTTTTGGATCTGCAGTGATTGGACGACTGTCATGTGACATAAGGCACAAAAACACGTGACCCTACTGAGGTCATTTCAGACCTTAAAGAACATACGTGACAATGCACAGTATATTGGACGTTTGCGATTCTTCCCCTGCACTGGAGATGCATTATACATGTCTTATCTACTCCAAGCTTCTCAGGATCACATGCCAAACAAACCATGCCGACCGCTAAATCACTTCCAAACAACACAGACCTAAATAGTTCACAAAATCCTACCACAAACAAACATCGTAATACTGTAATGAGCCACGGCATTGTCCTTTTCAAAGCGGTTCCTGTTTTAGTTTCATAGCAGGAGGGCAAAACAGCTAATAACACACAGGCACAGCAGAAACGCTCGACATTTACAGTCTTGCGGAGTGAGTTTGATCGACCATCTGGCCTCTGAGAAGTGCGTTGTAAAAACAGTGAAATCAATGGAGGCATGTCTACTGTGGATGCCCACCATTACACAAGCCGTGTTGATGGTGTAACACTTAAACTAGCACACGGCCTCCCTTCCGCAACCTGCCTGCTCTCTCCGGACACGAGTCTCTCTAATGAATTTCAGTGCTCACGATGTGGCAAACGAACCCTCCCGCAGGCCCGCTGGTTGCATGAGTGCACTATTTTTTCCCGTATCACCGAGGACCTTGAGTCTGGCTACACAGTGCGTAAAGTTAAAGAGTCGGTGTCCGTTACGCGTTCTCTTACCTATCCGTATGACATGGGGCATCCCGAAAGAGCTGTGAATCCAGAAGAGACCCACTATAATCGCGCTCCAGTATTCCACATATTCCCTCCTGTTCTTCATGACTGGAAAACACTGGGATCAATCCAAGGAGCTCTCCAAAAACTGCTCATCAAATTTTAAATGGCTGGGAGTCATATGAGGATTGGACTGACTGCGACAGATTTGCTCTCATTGTAGTTGGTTTGAACACGAGCTCGCTGTATTAATTATTTTATTTATTAATTTGGGCGAGAGAGTGAGTGAGTGAGTGAGTGAGTGCGCGCGCGCTCGGGTCTCAGACGAAGCTCCGGATCGGTGCGCGTCTCCACCTGCGAGTGCTGAGCTGCTGAAATCAGCCTGCAGGAGTCCCTGTATCCCCTCTGTATCTCCTCCTACCGCTGATGCCGCAACAACCGGGCTGGAGTCCCGCGTCAGCGTGGATGGGGACTAACGCTTCACGTTACACTGTCCGTGCTGCGCTGTTCGCATATTGCGTGCTGTCAGAAATGCAACAGCAATGAGAACAGCCGCGCGCATGCAGGGTCATTGTGATGAGCATCGATAAATGTCAAATATTTGGCCTTCACAGTTGGCTACAAAAAGTGTTAGATCGCATTGAAAATCAGTGCTTTTTTAGTTAAAAAAAAAAAAAAAAAAAGTTTTAGGATTTTAAAATGTAAAGATAAAAGTGCAGATGCATGATGTGAATTTAATGTGAAATAATTCAGATGCTGCACAATTTCTAGGGCACTAATCAAATGGAAGCATAGTTGTGATATTGTCCATGTTCACTCCTTTGTATTAAAGGTCAGATTTCTTGGCTGCTTCATTGAAGCACAAAATGCTATTTGGAAAATTCTCAAAACATGCTGGATAATGTGGATCATTGTGGAGTGCAGCTGTCACCTACAGCAAAAGGGCGACACAATATCACTAATATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAATTAATGTGGCTGAGATAACATAATATTTTGAGTTTCTGTTGATTAAACCAATTGCCTTCATTTGTATTAACTCACATTTTCAATTAATTTCAATGAACTGAAAATTTTAAGGCAATTAGGTAACTTATGTTTTTAAGTTAAACCAATATATATATATATATATATATATATATATATATATATATATAACAAAGTGAAAATGTTTACAGGTATAGTGGTCACCCTTTGAACCATACTGTATGTCTTATTAGAGTGAAGGAAATGATAAATTCACTGTTTTTAAAGATAGAAATCATATTAATTGTATTTTATTATAATATCACAATGGAGTGAACATGGGGTGAATTTTAGGTAATTTAGCTGGTTTCAGCCATTTTTGCCATATACTTTCTAAAATGAAAAACTTGGCAATTTATTTAGAAATATTTCAAGTGTTTTTTCCCCCCTGTTCCTAAA

Function

NR:

description
PREDICTED: glutamate receptor ionotropic, kainate 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_02442834_02444552.mRNA True 3003 mRNA 0.38 3 2441659 2445951

Neighbor

gene id symbol gene type direction distance location
CI01000065_02222213_02282352 NA coding upstream 159227 2222029 ~ 2282432 (+)
CI01000065_01938179_01949512 NA coding upstream 490908 1938085 ~ 1950751 (+)
CI01000065_01867964_01868983 NA coding upstream 571846 1867788 ~ 1869813 (+)
CI01000065_01452148_01608735 GRIK2 coding upstream 832924 1452148 ~ 1608735 (+)
CI01000065_01076737_01078446 NA coding upstream 1362071 1076737 ~ 1079588 (+)
CI01000065_02562189_02562709 NA coding downstream 116238 2562189 ~ 2562738 (+)
CI01000065_02714893_02755256 NA coding downstream 267490 2713441 ~ 2755370 (+)
CI01000065_02770419_02775297 NA coding downstream 324098 2770049 ~ 2776165 (+)
CI01000065_02783579_02788578 NA coding downstream 337364 2783315 ~ 2788866 (+)
CI01000065_02806198_02813320 NA coding downstream 360247 2806198 ~ 2813722 (+)
G268576 NA non-coding upstream 43952 2397197 ~ 2397707 (+)
G268502 NA non-coding upstream 290711 2150748 ~ 2150948 (+)
G268472 NA non-coding upstream 350549 2090845 ~ 2091110 (+)
G268469 NA non-coding upstream 351669 2089448 ~ 2089990 (+)
G268468 NA non-coding upstream 352264 2089035 ~ 2089395 (+)
G268603 NA non-coding downstream 18832 2464783 ~ 2530305 (+)
G268635 NA non-coding downstream 91193 2537144 ~ 2537375 (+)
G268638 NA non-coding downstream 93039 2538990 ~ 2539204 (+)
G268641 NA non-coding downstream 99446 2545397 ~ 2545668 (+)
G268647 NA non-coding downstream 117460 2563411 ~ 2563637 (+)
G268525 NA other upstream 201661 2239159 ~ 2239998 (+)
G267577 NA other upstream 1359004 1082153 ~ 1082655 (+)
G267432 NA other upstream 1658780 782283 ~ 782879 (+)
G266932 NA other upstream 2396993 43038 ~ 44666 (+)
G268805 NA other downstream 162956 2608907 ~ 2638205 (+)
G269181 NA other downstream 1013006 3458957 ~ 3462928 (+)
G269225 NA other downstream 1106853 3552804 ~ 3553214 (+)

Expression


Co-expression Network