Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000065_02679973_02700843 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000065 |
| NCBI id | null |
| chromosome length | 4956624 |
| location | 2679839 ~ 2701444 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| putative gag protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000065_02679973_02700843.mRNA | True | 1863 | mRNA | 0.46 | 7 | 2679839 | 2701444 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000065_02358877_02366169 | NA | coding | downstream | 313670 | 2358853 ~ 2366169 (-) |
| CI01000065_02288372_02357728 | GRIK3 | coding | downstream | 322111 | 2288372 ~ 2357728 (-) |
| CI01000065_01982908_01987337 | NA | coding | downstream | 692351 | 1982403 ~ 1987488 (-) |
| CI01000065_01955024_01969974 | NA | coding | downstream | 709616 | 1952778 ~ 1970223 (-) |
| CI01000065_01911879_01931555 | HACE1, HACE1.L | coding | downstream | 748284 | 1911512 ~ 1931555 (-) |
| CI01000065_02820772_02829132 | NA | coding | upstream | 118268 | 2819712 ~ 2829132 (-) |
| CI01000065_02940142_02940429 | NA | coding | upstream | 238610 | 2940054 ~ 2940813 (-) |
| CI01000065_02979795_02989709 | BVES | coding | upstream | 276399 | 2977843 ~ 2989763 (-) |
| CI01000065_02992054_02993108 | POPDC3 | coding | upstream | 290371 | 2991815 ~ 2993167 (-) |
| CI01000065_03015397_03024204 | NA | coding | upstream | 313408 | 3014852 ~ 3024204 (-) |
| G268836 | NA | non-coding | downstream | 3412 | 2676105 ~ 2676427 (-) |
| G268795 | NA | non-coding | downstream | 80847 | 2598591 ~ 2598992 (-) |
| G268790 | NA | non-coding | downstream | 86920 | 2592533 ~ 2592919 (-) |
| G268759 | NA | non-coding | downstream | 133375 | 2546106 ~ 2546464 (-) |
| G268751 | NA | non-coding | downstream | 141515 | 2538108 ~ 2538324 (-) |
| G268860 | NA | non-coding | upstream | 2568 | 2704012 ~ 2704359 (-) |
| G268923 | NA | non-coding | upstream | 89926 | 2791370 ~ 2791594 (-) |
| G269262 | NA | non-coding | upstream | 154220 | 2855664 ~ 2856587 (-) |
| G269250 | NA | non-coding | upstream | 221701 | 2923145 ~ 2924417 (-) |
| G269252 | NA | non-coding | upstream | 223133 | 2924577 ~ 2929006 (-) |
| CI01000065_00782736_00793467 | NT5C3A, NT5C3 | other | downstream | 1896178 | 782697 ~ 793467 (-) |
| CI01000065_00622545_00624625 | NA | other | downstream | 2055182 | 622123 ~ 624657 (-) |
| CI01000065_00563411_00579174 | MBPB, MBP | other | downstream | 2099812 | 562848 ~ 580083 (-) |
| CI01000065_00050903_00055774 | NA | other | downstream | 2625452 | 50386 ~ 55774 (-) |
| G267024 | NA | other | downstream | 2633752 | 43039 ~ 46087 (-) |
| G269348 | NA | other | upstream | 606999 | 3304357 ~ 3312480 (-) |
| G269679 | NA | other | upstream | 1072436 | 3773880 ~ 3774294 (-) |
| CI01000065_03794501_03806693 | VEGFAA, VEGFA | other | upstream | 1091679 | 3793123 ~ 3806693 (-) |
