CI01000065_02770419_02775297


Basic Information

Item Value
gene id CI01000065_02770419_02775297
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 2770049 ~ 2776165 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_02770419_02775297.mRNA
CTTTAAAAATGGTGTTTTACAAAAAATGCATTTTTACTGCCTATTTGTCAACTATACCCTTTTGTCATGATGATCATAAAATATGCCTGAAAGGATATTGCACAGCACCAAGATCTTCTCGTCTGAGCCATAGACATAATAAATACATAGACGCTCTATTGGCCGCTTTGAAACATTGCTGCGATACGTCAACGCGTCCGCCATATTGGATGCCTAGCTTCAGAAGGAATCATCAGCCCTCCATTGTTTTTTTACAGTAAGTAAGTGTTTGTTCTGGTCAAATGAACCAGGTACAGCATATGCCACCAAGCTAGCATGGTACACACCACAGGGAAGCTTTCTCAAAATCTGACGCACCACAAAACCGGAAATGTACACAAGGGCATTGTCCACAAGGCTACCAAAGCGGGTTGGCAGTTTGAACACAACGGAACAGGACAGAGGAGACGAGGAGGAGGAGCTGGAGACTGGAGTTCGGAGACGAGGAAACTGGAGACTTGGCCTGATCACACGTGCTACAAGCTCTTTACAACTCTACAGTTTGGTAAGTTTCATCAAGTTGTCCAGTTTGGAAAGTGTTTCTCCAGCCATCATCATGAAGCAGCGTCGCCAGAGAAGAACCAGGGCTCTTCCCACACACCTGAGGGGATTCTTGGTGGAGGGCGTCTCTTCCAGTCCGGACCCCTGTGAGCTTTCACAGCTGGCAGCTGTAATCAGGTTAGATCACACTTACAGCCGTATCTCTGGGAAAGCTCAAAGACCCACAGGTTTGGAGGAGCGCTACCTGAAGAACGCTGCTGTCCTTCCTGACATCCGTCCAGCAGCCTCAGTGTCTTCAGTGGACGTGTGTCAGCAGGAAGAGCCTGTTTCCATCCACGGCTGCAGCGTGCAGGGCTACCAGGACATCTACAGCTCTGTGGTGGAGCCCATGATGAAGACACGCTGCGGTCGGCGCCGTCCCTACAGTCTTGAGCTGGGACTGAAGATCAAGCAGCGGCTATGGGAGACACTCCAGTGCCCTTCACCGGTGGAGACGGAGCAGCCTGATGGACGCGTCCTGATCACTGAGAGCTTCTCCACAACCAGCAGAAGCTCTGCTCCTCAAATCCACGTGGACATCAGTGAAGAGCCCCTGCCTGAGGAACCCCGAAGAAAGAAGCCCAGACACTGAGTCATCACAGTGTCACATGGAGCCCGGAGAATCACACAGCGGGACCGACGTATGTAAATACTGTATATAGTCATAGAGTAAGTTTGTAGTTTTATGAGTAAGTTTCATTTTCTATAATAAGTTTCATTTTCCTGAGCAAGTCTTTTGCACACTTCTGTCTGGTTGTTAGGATGTTTTTGGTGATTGTCAGTGTGTTGATATGCGGTTCCCAGGATGTTCTACGTGGTTGTTGGGATGTTTTGGGTGGTCTCCTGTGTGTTGACATGCGTTTGTCAAGGTTTTTTGCTCGGTTGTTAGCGTGCTGCTTTGCGGTTGCTGGACTCTTCTGAGTGGATTTTCTGAGTGGATTTTCTGTGGATTTTCTGAGTGGAGTTGCTATGAGGTTGTTAGGATGTTTTGAGTGGCCGGTTGATATGCGGTTAGGGTAGGTTAGGGTCCCTCACGCGGTTTGCAGCTTGACGTGCTGTGAGGGCTTGTGTGCATCAGTGATGCTGAGAGCTACGCCACTGGTACTTCACAACTACTGGTAGGGTCACCCATAGTGGACAGGTCTCAGCTGAGATGCCAGACGAAGACAAACCACCTGATTCTGGACAGCAGCAGATTGATTTCATGTTCCTGGCAGAAGATCAGTCTTGTTACAACAACAAAATTACATGAATGGAAGAAAATTCGAACTGATTATGTGTGGAAGTCATCGATGGTTTGATGGAATCAACCGTTCAAACAGAACAAGGTAACACAGTTTAATATTAGCAAAGGCTGCTAATTATATTATCATTTCTTAAGTTTTTATATACGCGTGATAAATATGAAATAATTCATTTCTAAACATGATCACGTAGATACAGACGAGTAGTGGAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_02770419_02775297.mRNA True 2039 mRNA 0.47 3 2770049 2776165

Neighbor

gene id symbol gene type direction distance location
CI01000065_02714893_02755256 NA coding upstream 14679 2713441 ~ 2755370 (+)
CI01000065_02562189_02562709 NA coding upstream 207311 2562189 ~ 2562738 (+)
CI01000065_02442834_02444552 NA coding upstream 324098 2441659 ~ 2445951 (+)
CI01000065_02222213_02282352 NA coding upstream 487617 2222029 ~ 2282432 (+)
CI01000065_01938179_01949512 NA coding upstream 819298 1938085 ~ 1950751 (+)
CI01000065_02783579_02788578 NA coding downstream 7150 2783315 ~ 2788866 (+)
CI01000065_02806198_02813320 NA coding downstream 30033 2806198 ~ 2813722 (+)
CI01000065_02856492_02888060 INPP5B coding downstream 80327 2856492 ~ 2888455 (+)
CI01000065_02896930_02919963 MTF1 coding downstream 120765 2896930 ~ 2920163 (+)
CI01000065_02924635_02929062 YRDC coding downstream 148470 2924635 ~ 2929092 (+)
G268859 NA non-coding upstream 66438 2703400 ~ 2703611 (+)
G268796 NA non-coding upstream 170057 2599769 ~ 2599992 (+)
G268789 NA non-coding upstream 177138 2592533 ~ 2592911 (+)
G268787 NA non-coding upstream 181737 2588023 ~ 2588312 (+)
G268786 NA non-coding upstream 182323 2587427 ~ 2587726 (+)
G268930 NA non-coding downstream 25479 2801644 ~ 2801857 (+)
G268965 NA non-coding downstream 163023 2939188 ~ 2940607 (+)
G268974 NA non-coding downstream 173037 2949202 ~ 2950412 (+)
G268996 NA non-coding downstream 221371 2997536 ~ 2999784 (+)
G268997 NA non-coding downstream 224178 3000343 ~ 3001750 (+)
G268805 NA other upstream 131844 2608907 ~ 2638205 (+)
G268525 NA other upstream 530051 2239159 ~ 2239998 (+)
G267577 NA other upstream 1687394 1082153 ~ 1082655 (+)
G267432 NA other upstream 1987170 782283 ~ 782879 (+)
G266932 NA other upstream 2725383 43038 ~ 44666 (+)
G269181 NA other downstream 682792 3458957 ~ 3462928 (+)
G269225 NA other downstream 776639 3552804 ~ 3553214 (+)

Expression


Co-expression Network