CI01000065_02783579_02788578


Basic Information

Item Value
gene id CI01000065_02783579_02788578
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 2783315 ~ 2788866 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_02783579_02788578.mRNA
TAATAAAAGCGCGCACTTTGCTCGCTCTGCATCGCTTGCAGTTGGTTGCTCATTCTGGTGTTTCTTGTGTTTTCTCACTTGATTCGCGCTTGAGTCACAACAACTTGCATTTTAAATACATAATTTATTGCGCAATTTATTGCACAATACTGCACCATTTGTTGCTTTTATCTGTACACGACTTAAATCGGCACAGATAAATAACAAACCGTTGATCTCATTGCACATCTTGCGGTCTTCGGTAGCCTAGTTAAGGCTTTCAAAATGGTGCTATTTACTTTACTGGGACTGTGCGCTCTTTTCCTGCGAGAAAGGAAAAAAGCCAACAACACCCACTCCGGTCAAACTGAAAACGTGGACCAGAGTGAGGAAGTTCCACCTGTGGAGAGAAGGCCTGATGATGGTCAGACTTCTTCTCAGGGTATCACCAGTGACCCTGAAGTCCTCCCTACCACAGAGGAACCTATCACTGGTGACCCTGAAGTAAATGAGGACTGGCGTCAAGACCCATCATTGGAGGAGCCAGTCACTGGTGACCCTCAAATCGATGATGGCTGGAGTGACGACGTCTTCCGAGATGTAGTCGGTGATTTGTCCGAATGGAGTGCCGACGTCCTCCATGCTCTCGACAGTGTCATGTGCAAGTTTAACGACGACTCCTTCCAAACTCCTGTTGATGATGCACCTGACATGAGTGATGACGTCCCTGAAGCTTCAGATGGACTAGCAGAGGACACTGTGGCACCTCAGCTGAGCCAGCCGCAGGATGATGAGAGAACAATTATGGAAATCAATTCCTTGAGCTATGAAATCGGTGATCAACTGGGTGAAGGAGGCTTTGGAACCGTTTATGCTGCGACTTGTTTGGAAGATGACCGTCAGGTGGCGGTGAAATTTGCTTCCAGCGAGTATGCAAAATATGTCCACATTGACGGTTATTCCAGACCCGTTCCACTTGAGGTCGCTCTGCAAATGTTTGCCAATCAAGGGCCCAGGGTTCCTCAGATCATCGAGCTCCTGGACTGGAAGGATGAGGACGAGGACGATTACTACATTATGGTCCTAGAGCGGCCCATGCCCTGTCAGTCCTTGCATGACTACTTACGGAACTATACGGGCACCATTGATGAGGATTTAGCACGGATTATTATGGGAGAAGTGGCGTTCGCAGCTCAAATATGCTGCCAGCGTGGAGTGTTTCACCGGGACATTAAACTGGAAAACCTGCTGATTAACCCGGGCACCCTCGAAGTCAAACTGATTGACTTTGGATGTGGTGATTTCCTCACCAGTGCGGGTTACACGTCCTTTGCTGGCACAGAAGAGTACCGCCCCCCCGAGTATGAGATGTACGGCGTGTATCATGGGGAACCAGCGACAGTGTGGTCCCTCGGGATACTGTTGTTCGTAATACTTTTCTGGGAATATCCAAGCAGACGAGACCTGCGTATGATCAGTAAGAACGTCTGGAAAAAAGAGGGCTTGTCAGAAGAATGCTGCGATTTTATTCGCTGTTGTCTGCAGAGGAGCCCAAGGAAACGGATTGAACTGCAGAAAGTCAGTCTCCACGACTGGTTTAAGATGGCTGACGTGGAGAATAACAACAGAACAATTATGGGACAGTCTAATACCATCAACCTAACCTACAACACAGAGGCGTCAGCCCAAACAAACCGGTCCCAGCACGCCGAGGCCTACCCTTGCCACCACGGGCAAAACATCCACGATCTCTTCCCTTGTCTTTCTCTACTCCAGCCCATTCAATCGTTCCGGCCATAAGAAATAGACAGTAAGGCCCGTCGAGCACCAAGCTCGCGTCTCGGGCAGTGGCGCTCTCTTCCTGCAAAGGAACGGGCCTTCCTCCAGCGTCAGGCCGCTGCAACAGGCCCTCAGCAGGTATGCCGCAGATTCAGTTTTGGCCAGCTCCCACTCTCAACCCCTGTTGGCTCAAAACCGTAAGAGCACAGCTCAAATCCTTGTTTTCTGCCCTGGTTGAATTTCACTTCTGGCTTCAGTTGCTAAACCACGAGCACAGTTTATGTTATCTGAATACTCATTTCGATCAGA

Function

NR:

description
LOC562179 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_02783579_02788578.mRNA True 2067 mRNA 0.49 9 2783315 2788866

Neighbor

gene id symbol gene type direction distance location
CI01000065_02770419_02775297 NA coding upstream 7150 2770049 ~ 2776165 (+)
CI01000065_02714893_02755256 NA coding upstream 27945 2713441 ~ 2755370 (+)
CI01000065_02562189_02562709 NA coding upstream 220577 2562189 ~ 2562738 (+)
CI01000065_02442834_02444552 NA coding upstream 337364 2441659 ~ 2445951 (+)
CI01000065_02222213_02282352 NA coding upstream 500883 2222029 ~ 2282432 (+)
CI01000065_02806198_02813320 NA coding downstream 17332 2806198 ~ 2813722 (+)
CI01000065_02856492_02888060 INPP5B coding downstream 67626 2856492 ~ 2888455 (+)
CI01000065_02896930_02919963 MTF1 coding downstream 108064 2896930 ~ 2920163 (+)
CI01000065_02924635_02929062 YRDC coding downstream 135769 2924635 ~ 2929092 (+)
CI01000065_02961093_02964309 NA coding downstream 172227 2961093 ~ 2964309 (+)
G268859 NA non-coding upstream 79704 2703400 ~ 2703611 (+)
G268796 NA non-coding upstream 183323 2599769 ~ 2599992 (+)
G268789 NA non-coding upstream 190404 2592533 ~ 2592911 (+)
G268787 NA non-coding upstream 195003 2588023 ~ 2588312 (+)
G268786 NA non-coding upstream 195589 2587427 ~ 2587726 (+)
G268930 NA non-coding downstream 12778 2801644 ~ 2801857 (+)
G268965 NA non-coding downstream 150322 2939188 ~ 2940607 (+)
G268974 NA non-coding downstream 160336 2949202 ~ 2950412 (+)
G268996 NA non-coding downstream 208670 2997536 ~ 2999784 (+)
G268997 NA non-coding downstream 211477 3000343 ~ 3001750 (+)
G268805 NA other upstream 145110 2608907 ~ 2638205 (+)
G268525 NA other upstream 543317 2239159 ~ 2239998 (+)
G267577 NA other upstream 1700660 1082153 ~ 1082655 (+)
G267432 NA other upstream 2000436 782283 ~ 782879 (+)
G266932 NA other upstream 2738649 43038 ~ 44666 (+)
G269181 NA other downstream 670091 3458957 ~ 3462928 (+)
G269225 NA other downstream 763938 3552804 ~ 3553214 (+)

Expression


Co-expression Network