CI01000065_02940142_02940429


Basic Information

Item Value
gene id CI01000065_02940142_02940429
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 2940054 ~ 2940813 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_02940142_02940429.mRNA
ACAGGGTTGAAGTGGACTCAGAAGTATGCAGGTACAGTGTGATTGACACCATTTTAAAAAAATATATATATATTTCAATTCTTTGTTTATTTGATTGTTCTGATGTTGACTGATAATGTCTGATCTCTCTCAGTGGATGTGACTCTGGATCCTGATACAGCGAATCCATATCTCATCCTGTCTGATAATGGAAAACAAGTCAGTCATGGAGACACTGAGCAAGACGTCCCAGAAAACCCAAAGAGATTTTATGAGGGTCTTTGTGTTCTGACAAAGAAGGGATTCAGTTCAGGGAGATTTTACTATGAGGTGCAGGTGAAGGGAAAGACTAAGTGGGGTTTAGGAGTGGCCAGAGAATCCATTGACAGGAAGGGGAGGATCACAATGAGTCCTGAGGGTGGAATCTGGATTCTGGGTCTGACTGATGACAATGAATATATAGTTTGTGATAATCCATCTGTCTCTTTCCCTCAGAGTGTGAGACCTGAGAAGATGGGTGTGTTTGTAGATTATGAGGAGGGTCTGGTCTCTTTTTATGACGTGGGCTCCAGCTTTCATATCTACTCTTTCACTGGTCAGAATTTCACTGAGAAACTCTATCCATACTTTAACCCAGCCGATAATGATGAAAGTAAAAACTCAAGTCCACTGGTCATCTCACCAGTCAGTTAAAATGAACAGATAAACCTGGAAAGATTATGGACCATGAAATTCCTAAATGAGATGTTCATTTACACAAACGGAAGCTCATTTCTATAAA

Function

NR:

description
Zgc:136713 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_02940142_02940429.mRNA True 760 mRNA 0.40 1 2940054 2940813

Neighbor

gene id symbol gene type direction distance location
CI01000065_02820772_02829132 NA coding downstream 110922 2819712 ~ 2829132 (-)
CI01000065_02679973_02700843 NA coding downstream 238610 2679839 ~ 2701444 (-)
CI01000065_02358877_02366169 NA coding downstream 573885 2358853 ~ 2366169 (-)
CI01000065_02288372_02357728 GRIK3 coding downstream 582326 2288372 ~ 2357728 (-)
CI01000065_01982908_01987337 NA coding downstream 952566 1982403 ~ 1987488 (-)
CI01000065_02979795_02989709 BVES coding upstream 37030 2977843 ~ 2989763 (-)
CI01000065_02992054_02993108 POPDC3 coding upstream 51002 2991815 ~ 2993167 (-)
CI01000065_03015397_03024204 NA coding upstream 74039 3014852 ~ 3024204 (-)
CI01000065_03037531_03045960 SMPDL3B coding upstream 96548 3037361 ~ 3045960 (-)
CI01000065_03060532_03105332 LIMD1 coding upstream 118604 3059417 ~ 3106175 (-)
G269303 NA non-coding downstream 887 2938708 ~ 2939167 (-)
G269302 NA non-coding downstream 1770 2937920 ~ 2938284 (-)
G269253 NA non-coding downstream 6508 2932150 ~ 2933546 (-)
G269252 NA non-coding downstream 11048 2924577 ~ 2929006 (-)
G269250 NA non-coding downstream 15637 2923145 ~ 2924417 (-)
G269304 NA non-coding upstream 8732 2949545 ~ 2950332 (-)
G269337 NA non-coding upstream 167475 3108288 ~ 3109555 (-)
G269348 NA non-coding upstream 363544 3304357 ~ 3312480 (-)
G269424 NA non-coding upstream 410787 3351600 ~ 3352903 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 2156393 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 2315397 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 2360027 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 2885667 50386 ~ 55774 (-)
G267024 NA other downstream 2893967 43039 ~ 46087 (-)
G269679 NA other upstream 833067 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 852310 3793123 ~ 3806693 (-)

Expression


Co-expression Network