CI01000065_02979795_02989709 (BVES)


Basic Information

Item Value
gene id CI01000065_02979795_02989709
gene name BVES
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 2977843 ~ 2989763 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_02979795_02989709.mRNA
ATAAACCAATTAGATTAGTCTTTTGAGAAAAAAACAGACCACCTGTGGTCATTAATGTCGCCCTCCAGCGGTGGAGTCGCGCAGGTGCGCAGAGGAGTGGCCGCTTGGTTTGTGCCCATTTTAAGTCAACGCCTGTCATCTGACTGGAATGCGCGCCTCACACACTGCAGCTATACCAGTCTGTTATCTTCTGCCTTAACATTCCTCCAGACCGCGCACATTACAGCTTCAATCGACAACTCCGATCATTACTGCGGAACGCGTCTGAGTTACAGCATTTATGTGTGCCATTCACATAAGATACTTGCGAATGTCCCGTCACTGTCGGGTGATACAAACGCCACGTCATGCCAGGACTGGGAACAGTCTCATCACCTGCTGTTCCACCTGGCCAACCTGAGCCTCGGTGTGGGATTCCTCATCCCCACCACACTCGCGCTTCACATGATCCTCCTCAGACTGCTGCTGATGACAGGCTGCTCTTTGCTCATAGCGTGGGCCACGTTATACAGATGCACGCTGGATGTGATGGTGTGGAATGTGGTTTTCCTTTTGGTGAACTTCATGCACTTCTTCTTCCTGCTTTATAAACGCAGACCGATTAAGATTGACAGGGAGCTGAAATCCGTGTACCATCGCATGTTCAAGCCTCTGCATGTACGCGAGGCTCTGTTTCAGAGGCTCACCGGCCAGTTCTGCACCATCCAATCCTTAAAGAAGGGCCAGGTCTACGCGGCGGAGGACAAGACGTCTGTTGACGAGCGCCTCAGCATTCTCCTCAAAGGAAAGATGAGGGTATCGTACCGCGGTCATTTCTTGCATAATATTTACACCAATGCCTTCATCGACTCTCCAGAATTCAGGTCGACTCAGATGAACAGGGGTGAGAGGTTTCAGGTGACGATCACTGCTGAGGAAAACTGCAAGCTCCTGTGCTGGTCGAGAGAGCGTCTGACATACTTCCTGGAGTCGGAGTCGTTTCTGAACGAGGTGTTCCGGTACCTCATTGGCAAAGACATCACCAACAAGCTCTACTCTCTCAATGATCCAACCCTGAGTGACAAGGCTGTGAAGAAAATGGACCGTCAGCCGAGCCTGTGCTCTCAGCTGTCCATGATGCAGATGAGGAACAGTATGGCGAGCACCAGCGACACGGACGACGTTCTCAACCAGATCCTGAGGGGCGGCTCAACTGGATCATCACTCCAATACCAGACCAAAAAAGAAGACAAGATCTGTGGCATTTGTGCCTGCTGTACAACTCCTGTATCTGGAGTAGAGGGACCGTTCACCAAAAGACCGTACGAGGGACTTTCTAAACCTGGTGTGCCTTTTGCACTACCCTGGTCCAAGGCATTTGTGGAGTGGGTGCCGCCTTCACCCCGCCAGATGAAGCGGACACCTCAGCCCACCACAGACACTGAACCAGAGCCTGTTGTGGACAACGAGCCAGAAGAACCTGAGCCATACCCCGCTCCGGAGCCTGAGCACAGCGATGCGTCTGACCACTTACACGAGCCGGCAACATCGCCCGTCCCCAAGAAAGTACTCATGGAGTATGAGGGCATGGAATGGAGCCCCGCCCACACTCGTGCCACTGGCCTCTGACTGTGAATTGGAGGTATTTGAGGAGGTAATACCCCTTTTTCTCTTGCCCCTGCTGGTCCTGCCCAGCTTAAAACTTCCTGTGACCCCGCTGGTCCCATCCAGCTTATAACTTCCGGTGTCCCCAGAGTTCCCTCCAAGCATCCCTCTCCCACCTCCTCTGTCTAAGCCAGCCAGTTCTCCAGCTCTGCCCCTGCGTGAGGATCCCCCGTCTCCGCCTCCTTCCGCCAAGCCCCGGACTCTACCTCGGTCCTCCGACCCATGGTTTTCGCCTTGGCTCCATGCTCCCTCGTCTCCACCATGGCCCGTCATCCCAGCAGCTCCACAGGGCTCCCTCGTCCCTCTGTCTCCGCCTTGGTCAGGCATCACCCTGGTTCTGTCACAGGATTCCTGACTTCCGCCTCTGCCCTCCATCCCTTCGGCTCCACCGGGCTCCGCCTTCCCTCCAGCTCCACCACAGTCTTCCGGGTCCCCACCTCTGCCTCAGTCCCAAGAGCCATCAGCTACACCTTGGTCTCTAATGACCTCTGTGGTCATTAAAAATCCCATGGCACTTCTCGTAAAGAGTAGGGTTGAAACCCCGGTGTCCAGGCCAGGTTTCCTTCATTGGCCTTTACCAATCATGGCCTCCTAATAATCCCCATCCTTTGAACTGGCTCTAAGCCCTCAGTTTGAGTTAGTTCCCTGTCTGGTATTGTTTGTATTAAGTGTAGTTGTCATTCTCTTTCTCCTTTCTCATTGTATTGATGAACAAATACAATCTTTTCACACAAAATTAACACTGCAGCCCATCTGATATTGATATAGAGCCATTTTGCATGGCTATAGGTGTGATATTGCTTATATATTTCCAAAAATATGACACATCTTTCATTCTTCAGGTCAATCATATATATTCATGGAAAAAAAAAAATCAGTTTGAATGAGGAAAGCGATATCTTTGTCATAGTATCCTTTCAATGGTTAAAGGGTTAGTTCAAATTTCTGTCATTAATTACCCTCATGTCGTTCCAAACCCATAAGACTTTTGTTCATATTCGGAAGACAAATTGAGATATTTTTGATGAAATCTGAGGGTATCTGAACCACACATAGGCAGCAACGTAATTGCACCTTTTGAGGTCCAGAAAGCTATTAAAAACATTGTTAAAATAGTCAACGTGACTACAGTGGTTCAATGTTGATGTTATGAAGCAACGAGAATAGTTTTTGTGCGCAAAAACAAAACTAAAATAATGAATTTATTCAACAAATTTGTCTCTTCCCTGTCATTCTCCTATGCTGTTTTCATTGCAATACTTCCAGGTTCTATGTCAGAACACTGGCTCTCCTGCGTCAGCATCACATGCATGCGTCGCGCTGCTCACGTGAACAGGCGTCGGCCAATACTGAGTCTGCGGTCTGACATAGAACCTGGAAGTACTGCAGTGAAAACAGCATAGGAGAATGACAGGGGAGAGACAAATTTGTTGAATGGACTGAACAGAAGAAATGAACCAGCAAAGATGTCCACGTCAAAGAAGGACACAATGGTAGCTTGAAGGCGTTTACCAGCCAGAGCAAACTTTTCCGGAAAGTTCACTTTGGAAAGGTTTCGAACTCCAGAAACTAACACAAACCGAACTTCATTTTGACCTGATTTTGTTTGAAATGACATCACACCAGTTTGTCCTTTGATTTTGCTTGAAGTATATCAGGCCCAAGTAAGTCAAGTGAGTCAGTCACTTGCCGCCGTCTACTGGCAAAACTATGTAACCTGCACTAAAGTCATTGATAAACCCCCTTCATTAACATAGACCGTTTCTCAATACTAAGTATGCCAACATTATAATATAAAATATTATTTATTGAACAATAATAGGCATTATAAACTTTGTATTTAATATATATATTAAATAAGTTGTATTTTGGATACCTTTGGAGTAAAAAACAAAAACAAAACCCTAAAAAATAAA
>TU305587
GTTTTTGTGCGCAAAAACAAAACTAAAATAACAAATTTGTTGAATGGACTGAACAGAAGAAATGAACCAGCAAAGATGTCCACGTCAAAGAAGGACACAATGGTAGCTTGAAGGCGTTTACCAGCCAGAGCAAACTTTTCCGGAAAGTTCACTTTGGAAAGGTTTCGAACTCCAGAAACTAACACAAACCGAACTTCATTTTGACCTGATTTTGTTTGAAATGACATCACACCAGTTTGTCCTTTGATTTTGCTTGAAGTATATCAGGCCCAAGTAAGTCAAGTGAGTCAGTCACTTGCCGCCGTCTACTGGCAAAACTATGTAACCTGCACTAAAGTCATTGATAAACCCCCTTCATTAACATAG

Function

symbol description
bves Predicted to enable cAMP binding activity and structural molecule activity. Involved in heart development. Acts upstream of or within several processes, including animal organ development; bicellular tight junction assembly; and skeletal myofibril assembly. Located in sarcolemma. Is expressed in several structures, including EVL; cardiovascular system; eye; integument; and optic vesicle. Human ortholog(s) of this gene implicated in autosomal recessive limb-girdle muscular dystrophy type 2X. Orthologous to human BVES (blood vessel epicardial substance).

NR:

description
popeye 1

GO:

id name namespace
GO:0034446 substrate adhesion-dependent cell spreading biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_02979795_02989709.mRNA False 3560 mRNA 0.48 10 2977843 2989763
TU305587 True 366 lncRNA 0.40 2 2978002 2978592

Neighbor

gene id symbol gene type direction distance location
CI01000065_02940142_02940429 NA coding downstream 37030 2940054 ~ 2940813 (-)
CI01000065_02820772_02829132 NA coding downstream 148711 2819712 ~ 2829132 (-)
CI01000065_02679973_02700843 NA coding downstream 276399 2679839 ~ 2701444 (-)
CI01000065_02358877_02366169 NA coding downstream 611674 2358853 ~ 2366169 (-)
CI01000065_02288372_02357728 GRIK3 coding downstream 620115 2288372 ~ 2357728 (-)
CI01000065_02992054_02993108 POPDC3 coding upstream 2052 2991815 ~ 2993167 (-)
CI01000065_03015397_03024204 NA coding upstream 25089 3014852 ~ 3024204 (-)
CI01000065_03037531_03045960 SMPDL3B coding upstream 47598 3037361 ~ 3045960 (-)
CI01000065_03060532_03105332 LIMD1 coding upstream 69654 3059417 ~ 3106175 (-)
CI01000065_03113629_03136974 LARS2 coding upstream 123695 3113458 ~ 3136974 (-)
G269304 NA non-coding downstream 27511 2949545 ~ 2950332 (-)
G269303 NA non-coding downstream 38676 2938708 ~ 2939167 (-)
G269302 NA non-coding downstream 39559 2937920 ~ 2938284 (-)
G269253 NA non-coding downstream 44297 2932150 ~ 2933546 (-)
G269252 NA non-coding downstream 48837 2924577 ~ 2929006 (-)
G269337 NA non-coding upstream 118525 3108288 ~ 3109555 (-)
G269348 NA non-coding upstream 314594 3304357 ~ 3312480 (-)
G269424 NA non-coding upstream 361837 3351600 ~ 3352903 (-)
G269436 NA non-coding upstream 407347 3397110 ~ 3397359 (-)
G269440 NA non-coding upstream 447375 3437138 ~ 3437390 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 2194182 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 2353186 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 2397816 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 2923456 50386 ~ 55774 (-)
G267024 NA other downstream 2931756 43039 ~ 46087 (-)
G269679 NA other upstream 784117 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 803360 3793123 ~ 3806693 (-)

Expression


Co-expression Network