CI01000065_03244494_03285831


Basic Information

Item Value
gene id CI01000065_03244494_03285831
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3244494 ~ 3285831 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_03244494_03285831.mRNA
ATGGGAATTTGGCGGTTCACGTGCTTTTCGCTTCTTTTGGGTTTTTTCCTGTCGTCATTCTCGGAGCTCACAGGTGATGCAGAGCTCAAAGTTGTTGTTGAAAAGGGCACAAGCATCCACATTAATACAAGTGCTGGCATAAACACACAGTGTGAAGTTTGTATAAGACAGGTGTGCCAGTCTTCTGTGATCCTCAGAAGTGATACGAGTTTGAATTTCACCTGTTCACAGCCAGAGAATGTGTTCACCGTGCAGATCATCACAGATACTGTGAAATCAATCATTGAACCCAAAGAACACCATGTCTTCCAAAAGTACAATCGGACCTTCACCTGGAATCTGAAGCCTCCAATTCCAAAGGCAGTCAGATTGATTTTCAATTGGCCTGGTTTAAAGCAGATTCAGCCTACAGACAGCTGCCCAGACAAACATGTTTACATGATTACAGTGGCGAATATCAGTGTTGGGAGGTTTTGTCATAATGGACACATTAGAGAATTTGATGTGCAAAATTTTGGCAAACTGTCTTTGGAAGTGTCTGGAGGTCAGCCTCTGGAAATGGAAGTTTACACTGTATCACTGGAATGTGGCCTTGCTTTACTGACTTTAATCCAGGTTGTTCTCCCAGAGAGGAGTTCAACCCAGAAATTCTTTACCCCAAACCCTTTTCCTGCATATGCAGAGACAACGTGGTTTTTCACCGTGCCCCATGAGTACTACACAGAGGTGCGCATTCTAAACTACACTGTTCCAACATGCGTCCAACCTGATATCCCAACAATGAATTACATATGGGGCGACAAGGAGGTTCTGGTTAAACCGCTGAATGAAAGACAGCCATCGTTTGAGACTGGCAACCTTATCCTCACCATAAAGAACTGCGAAATATCCCAGTCAGGTCCTCCATCGGAAGGCCTAATGGTGCACTTTCAAGTCTCTGCCAGCAAGAGAAGAAAGGGGCATTGTGAAGGGGTTCTGCCTGAGAATCAAACGCTACAAATACGTGTGAAGAAAAGGAATCCCAAGTCCACCTGTGTGTTGAAACGGAATTCAGACGAAATGGACACAGTCATCATAGCTTCAGGGGACTATTATGACATTGAATCCTTTCAGTGTAACATGGATGAACTAGAGTTGACTGTCAACCAGACTATAGAATGTAAAGAATGGAGAAACTGTGCATACACTACATTCCCTATAACCTTCAGTTACAAGGAGAACTGTATCCCGGGAGTTCTGAAGACGATCACATGGCATCTTCATGGCCCACAGAACAGTGCAGTGGAGCTACAGTCCCCTACAGACGGTCTGCGTTACTGTCTACCGGAGGACAAATGCAATAGCATCCTTCTCCTAAATGTGTCCCATGGTAACCCTGACATCACTGTTGGGCAGTTTTGTCCAAAGGGAGACATTGAGAAAATCCAGATCCATGAATCCAAGATTGCAGTAACTGCCTCCGTTACAAGTTTCAATGACCCAAGTTTGGAAACTAAATCCTTTTTAACTTATTCATTTACACAAGACATATCAGAGCATTATATATTCACTGTTGCACCAAAAATGGATAATCCTACCATGTTGGCGACCCCAGCATGGCCGTCTGGGATGAAACCCTCTAGCAATGTGTCCTGGATCATTAACATGGAGCCACAGCTTAAGAGCAATCTGAAGTTCAAAAATGTCAGCCAGCCCGAGTGTACAGAGGTGCACACAAACATTGCAGTGCAGACCATTCGGCCTCAAATGATGGTGTACAGTACTAAAAAGGATGAGAAGATTAATGATGTCCTGGTCCCAGAAAGTTTTTACCTTAACATGACTAACTGCAAGTCCCTGACAGGAAGCTTCAGGGCAATGATGGAGATCACACTGCAGAACAAGACAAACAAACTTCTGGGCATCATCCTGAGTATCGTGGGCATTGTGTTAATGATCATAACAGCCGTGGTGATCTGGATTGTTCTCAGGAAAAAGAAGAGGAATAAGACTCCCCCAGTGTCCAACTACAATCCCAATGCTTTCCTTCCAGGCCTCCATGGCATCCCCAAAACACAGGAGGAGGAGGAAGATCCTCACGCTTATGTGTACATAGATGATACTCTAGTATATTCCCATCTGCTTAATAATGAAGCTGAAAATGAACAATGTAAAGATGAGAGCGGCCCACCTTTACCTGACAGACCAGTCAGCAAAGGTAAAAGCCTAGTCACTAAAGGCAGCGCGATGGTTGACAATGAGCTCTATGGTTATATTCAGGGACAGTCAACTACATCTGGCTCACCAAAGTCTCCCACCAAAACCTCTGAGGACGGCGCATATGAAAGCAGACTGTCTGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_03244494_03285831.mRNA True 2340 mRNA 0.45 9 3244494 3285831

Neighbor

gene id symbol gene type direction distance location
CI01000065_03237462_03238124 TMEM158 coding upstream 6341 3237374 ~ 3238153 (+)
CI01000065_03027516_03035037 MECR coding upstream 209400 3027516 ~ 3035094 (+)
CI01000065_03002626_03002997 NA coding upstream 241479 3002587 ~ 3003015 (+)
CI01000065_02976459_02977209 NA coding upstream 267274 2975351 ~ 2977220 (+)
CI01000065_02961093_02964309 NA coding upstream 280185 2961093 ~ 2964309 (+)
CI01000065_03304326_03307505 NA coding downstream 17894 3303725 ~ 3307557 (+)
CI01000065_03344678_03368295 NA coding downstream 58500 3344331 ~ 3368472 (+)
CI01000065_03398558_03399971 CNIH4 coding downstream 112727 3398558 ~ 3400425 (+)
CI01000065_03486630_03494354 NA coding downstream 200736 3486567 ~ 3495740 (+)
CI01000065_03692428_03692874 NA coding downstream 406597 3692428 ~ 3693420 (+)
G269033 NA non-coding upstream 131580 3111847 ~ 3112914 (+)
G269029 NA non-coding upstream 135556 3108590 ~ 3108938 (+)
G269005 NA non-coding upstream 162813 3025208 ~ 3081681 (+)
G268964 NA non-coding upstream 221268 3017892 ~ 3023226 (+)
G268960 NA non-coding upstream 228992 3012493 ~ 3015502 (+)
G269167 NA non-coding downstream 152141 3437972 ~ 3438539 (+)
G269181 NA non-coding downstream 173126 3458957 ~ 3462928 (+)
G269205 NA non-coding downstream 230463 3516294 ~ 3516541 (+)
G269218 NA non-coding downstream 256272 3542103 ~ 3542572 (+)
G269223 NA non-coding downstream 265939 3551770 ~ 3551991 (+)
G268805 NA other upstream 606289 2608907 ~ 2638205 (+)
G268525 NA other upstream 1004496 2239159 ~ 2239998 (+)
G267577 NA other upstream 2161839 1082153 ~ 1082655 (+)
G267432 NA other upstream 2461615 782283 ~ 782879 (+)
G266932 NA other upstream 3199828 43038 ~ 44666 (+)
G269225 NA other downstream 266973 3552804 ~ 3553214 (+)

Expression


Co-expression Network