CI01000065_03304326_03307505


Basic Information

Item Value
gene id CI01000065_03304326_03307505
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3303725 ~ 3307557 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_03304326_03307505.mRNA
CTATATAAACTTTTACGCGCTGGACTCTACAGACTTTCTCACACACACACACACACACACACACACACATATATACATACATTTACATACATTTTTCACCTTGGATGTTTAACGTGGTTTTTGTGTGTACACGGATTGAACTGTAAATACACTTGGGTTTATTGATGACATTTGTCTCCTGTTTTATTTTTTTTGTTTTGTGTTGTTTAAGTGGCACAATCGTTCCCCTTATTTAGTGTATCCTCCTGGCATACTAACTGGAGTGTTACATATTGGTGGCCCGTACGGGGACGTTCTTTTTTGTGTGTAATTTTGTTTTACATATTTTTAAAATATGGAGAACACAGATGTAAATACCCAAGAACAAGATGCAATTGTGAATACTGACAACAATGATAATGTAACTGAAGCTAGGAGTAGTTCTGAAACACCCAATGCAGATTTCACTGCAGGCCCGTTTGTTACCAGACGCAATCCAACTGCTGAAATAACATCTATGCCAAGCTCACTGTATATTTCAGATGATGATGGAGAAACTGATGGCGATGATGATGATGCTAATGATGAAAGCTGTGTAATGAATGTGAATATGGTACAAACAATGCAAACAGACATAGCTCAAGTCAAGGTGGATTTACTGGCCCTTAATACTAAGGTACAAACATTTGAGCATGAGTTTAAACAGTCTGTAGAAAGCACCCTCAATCAGGAGTCCAGTTTCAGGGATGCTGTGGACGCTAGCTTAGCAGACTTAGAGGACTCTTTTCGTAACTGCTTGGAGAAGTTGGAGAGGGCTGTGGTGGACTGTTTGCTGAGGAGAGATGAAAAGTGGGAACGTCAAATGAAGAAGCTACGACTAACTAGTACCCCTTCTCTCTCCAGATTACACTCTTATACTCCAGCTCACTCTATTTCCTCGGTTCACGCTCCCGTAACCCCAGTGCCAGCCCCTAGAGTTAGAGTACCACTACCAAAATCTGCCAATGCAACATATGTCTCCCCTGTGTCTACACCACTAACCAATGTGCTTAATCCTCCAGCTGTTCCAAGTACATTTTCTTTCTGCACTCAGCACCCTATTCGGTTGGAGTTTCCCACCTTTGGTGACTCCTGCGAGACATCGGATGTGCTCAACTTCATCAAAAAATGTGAGAACTACTTGGACATCAGGCCCCTTCCCAGTGGGGAGCTCTACGGAACCCTGAACATGGCCCTCTGCCTCAAATGGAAGCCTGATATGGCGGAGGACGAGATGGTGAGCCGCATCCTCATCAACATTAACCCCAGGGTCGCGGGCTGTTTGAGGGGGACTGTGAAAACAGTGGAACAGCTGGTGAAAGTTGGATCTATGGTGGAAAAAAAAACTGTATGGGGGCAAAAGATTATTGGCAGAAATACCTCCAAAAACCTGGCTGGATTATCGATCGCACAACCTCACTCACTGACATCACTCCTCTTGGTTCCTGTAACAGTAAAAGGCAAAGAAGTTAAGGCCGTATTGGACACAGGTAGCACCTACACCCTCATGCAGGAAAACCTGTGGAGACAGTTGGGTAGCGCTGCTTCATCACTCCTTCCAAACTCCCAACAAAGATTCATCATGGCTGATGGGAAGGTTCACCTGGCAATAAACCAAAGCTCAATTAGTTACAAGTGGCATGATAAAGTCTGCAGTGTGGACACTTATATAATGAAGGGAGCCCACCTCGCATTTCCCCTGATTGCTGGCTTGGACTTCCTGAGAGCCGCTGAAGCCCTTCTGGATGTGGGCGAAGGAAGATATGGCCTAAAAACAGAGAAAGGCTATACATACTACCCTTTCTTGACATCTTCCATTACTCCGGGGCTGACAACGACTGGCGAAAACACTCTCCACCCTGTTGCTGTGACTCTCTACTGCGCCTTACCTCCAACCTGGCAACCACCACTCACTACCCTGAACACGGAGGTTGTTCCATGCTGGGACTCTGACAATCAGGAGGAGTTGCGGAAGCTGATGGCTACCTGGCCATGCACCACCTCAGATGTCTTGGGGAAGACATCGGTAGAACAACATAAAATCATCTTGTCTGATGAGGTACCGATTAAGTCCAGAGCATATAGAGTCTCACCCTTCAAAAGGAAGATCATTGAAGACCAAGTAGATCAGATGCTCCGAGACCACATCATTGAACCCTCCTTTTCTCCATGGTCATCACCGGTGGTGCTAGTCCCCAAACCTGATGGCCATGCAGCTCTAGCTTGGGCCTTCAATAGTCCCAAAACCTCCTCTCGTCTGACCCGCTGGACTCTTAGGCTGCAACAATTCCACTTTCAGGTGCATCACAGAAAGGGGTGCCTCAATCTAGGTCCAGATGCATTATCTCGTGCCTGTGAGCCAGACCATGTGCACTGCTTACCCATAACATCTAGGCATGCATCAGACATTCCTAATACACTAGATGAAATATCTCAAGCCCAGAAGAATGACACTACCATATCTCACCTGCAATCAGATCAAAAAAAAATCAGGAAAGTTCAAGGCCAGCACATTACCTTCGAGGACCACCAGTGGGTATTGTATCGCCGAGTACCTGTCAGAAATAATGGAGACAAGTTTCAAGTGGTCGTACCTCAGGCATTAATACCCACTTTCCTCCATTACTTTCATGATAACCCTCTGGGGGGACATCTTGGCCTGTTAAAAACTCTGTTGAGGCTTTTGGAGGTGGCATCGTGGCCAAGTATCCGCAAAGACGTCTGGCAATACGTCAAGGGCTGCGACACCTGTCAAAAATACAAGCATGACGAAAAAAACCTAGTGGGTTTCTACAAAACACGCAGAGATGGCAAGACACAGAAAATTGTCAGAATTCTCAAGGATGAGATCTTTACCCGCTGGGGGGTACCAAAATACATTATATCTGACCGTGGAGCACAATTTACCTCCAATGTTCTGGCCGAGCTCTGCAAGACCTGGGGCACTACCCAAAAACTCGCTACCAGTTATCATCCACAAACAAACCTGACCGAAAGAATAAACCGGACATTAAAAACTATGATTGCGTCATATGTGGGACAAAACCATCAAACATGGGACCAGTGGTTATCTGAATTTCGTTTTGCCATTAATACAGCTTACCAGGAGACCACTGGCAAAACTCCAGCAGAGTTGATGCTGGGCAGGCAGCTTCACGGGCCTTTGGAGAGATCAATCTTCAGACCACTTGCACCAGATCAAGCCTCATATCATCTCCTGGAGAGACAGAACATCATGGCAGAGGAGGTAAAGTCTAGAACGAAAGTGCAGCAAGCCAGACAAGCTAGATACTACAATACCCGAAGGAAAGAATGCGCAGTTTCACTTGGGAGATCTAGTCTGGATGAGAACACATCCACTTTCATCAGCCTCGAACAAATATTTTGCTAAGCTAGCGCCCAAGTGGAAGGGACCAGCTGAAATAATCAAAAAAATAGGGCCA

Function

NR:

description
Zgc:162621 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_03304326_03307505.mRNA True 3461 mRNA 0.46 4 3303725 3307557

Neighbor

gene id symbol gene type direction distance location
CI01000065_03244494_03285831 NA coding upstream 17894 3244494 ~ 3285831 (+)
CI01000065_03237462_03238124 TMEM158 coding upstream 65572 3237374 ~ 3238153 (+)
CI01000065_03027516_03035037 MECR coding upstream 268631 3027516 ~ 3035094 (+)
CI01000065_03002626_03002997 NA coding upstream 300710 3002587 ~ 3003015 (+)
CI01000065_02976459_02977209 NA coding upstream 326505 2975351 ~ 2977220 (+)
CI01000065_03344678_03368295 NA coding downstream 36774 3344331 ~ 3368472 (+)
CI01000065_03398558_03399971 CNIH4 coding downstream 91001 3398558 ~ 3400425 (+)
CI01000065_03486630_03494354 NA coding downstream 179010 3486567 ~ 3495740 (+)
CI01000065_03692428_03692874 NA coding downstream 384871 3692428 ~ 3693420 (+)
CI01000065_03709249_03716992 NA coding downstream 401587 3709144 ~ 3717908 (+)
G269033 NA non-coding upstream 190811 3111847 ~ 3112914 (+)
G269029 NA non-coding upstream 194787 3108590 ~ 3108938 (+)
G269005 NA non-coding upstream 222044 3025208 ~ 3081681 (+)
G268964 NA non-coding upstream 280499 3017892 ~ 3023226 (+)
G268960 NA non-coding upstream 288223 3012493 ~ 3015502 (+)
G269167 NA non-coding downstream 130415 3437972 ~ 3438539 (+)
G269181 NA non-coding downstream 151400 3458957 ~ 3462928 (+)
G269205 NA non-coding downstream 208737 3516294 ~ 3516541 (+)
G269218 NA non-coding downstream 234546 3542103 ~ 3542572 (+)
G269223 NA non-coding downstream 244213 3551770 ~ 3551991 (+)
G268805 NA other upstream 665520 2608907 ~ 2638205 (+)
G268525 NA other upstream 1063727 2239159 ~ 2239998 (+)
G267577 NA other upstream 2221070 1082153 ~ 1082655 (+)
G267432 NA other upstream 2520846 782283 ~ 782879 (+)
G266932 NA other upstream 3259059 43038 ~ 44666 (+)
G269225 NA other downstream 245247 3552804 ~ 3553214 (+)

Expression


Co-expression Network