CI01000065_03369379_03371121


Basic Information

Item Value
gene id CI01000065_03369379_03371121
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3368919 ~ 3371441 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_03369379_03371121.mRNA
AAAAGCCATATCACATTCTCAAAATTTATAAAATGGTTATCAGGCAACTGGTGAGTAACAGTTTCAAGGCCGATTTTACTCGCATTTGGTGCTTTGAAACCTGGCTAATCTAGCTTCGTCGTTTGACACTCGAGCAGCGCATAGCGTTTGTTGACAGGCGGTCGATGGGGCAGTGGCCAGACACGGTCCACTTCTGTCCTCTGGGGCTGATCCAGATGCGGCTTAGGGTGATCGTGTAGAAACTGAGTAGGTTGTGGGTAATTTCGACAATGTTCCTCTAACGGCTCCTGAGTTTAATCAGGATTTTGAGTGTCATAAGAATGACTCTGTCTCACTTGATGCAGGCGAGGAATTCTCAGACGACACTTTTCAAGCAGGACGGATCACGGCTTCCCCCTTGTCCTCCGAGGTGTGGTAAAAACTCGCCCGCCGCTTTACCCAGATTATATGGTGGAGCTTCGTGGCCGATACCCATGTCTGCTCATCTGATGCTGGGGGCGAATAAGTTCACCGAGTTCAAAGGAGAGGGGGAAGTAGGGTTAATGTCGGCTCCCCCAACGGAGCATTCACATGCTGCATACCTGGCTCCAATGCAAAATAGTGGTATTCGGCATCTGTGGTTGACTCTGGTGTCCAAACGAGATCGGAATGCTTTTTTCAGCGCACCGACCTCCCCATCCGGCCTATTTGGAGAGGGTCTTGACACGTTTCAGGCACGATTTGAGAACTCCAAGAAACAGGTGGAATCTCTGAGGGGTTCAATGCCTAGGAAATTTAGCAGACCAGCACAGTCAGCTGCACAACCTGGGTTTAGGTCGTCAGCCAAGAGGCCGGCTGCAGCAACAGCGCTGAGGCCCAGTGCTTGGGAGGCTGGACGAGAGCAGACACAGCCTAAACAACAGGCAGGGTCGGGAAAGAAGGGTTCGCCCCCGGAGGAAAATGCAGTGATATGCAATATCCTGAAATGTTCACAAAAAGAGGCGGGGGTTCCTCAGGTGATGCCGGGGATCCTCGCTGTCAGCCTCGAGTGGTGGCGCACATGTGCACCAACACCGTGGGTTATTCTCACGATTCAGTGGGGCTATCGTAGTTCCTTTCGCGAGCTCTGGTATTTTTGCAGCTCCTTTTGCGAGCTCTGGTATTTTAATAAATCTCAAAAAGAGCTCCCTGGTTCCGTGTCAGCAGATTTCATATCTCGGTTTAGAGATAGATTCAGTACAGAACACAGCTGTGCTGTCAGTATGGAGGGTCAAGGAATTTCGCAGCTGCCTGAGTCTTTTTCGGCTGGGCAGGTGAATGTGTTTTCATACAGTGTTGAGACTGCTGGGGCTCATGTCCTCAATGATAGCAGTTGTTTGCCTGGGTCTCCTCTTAATGGGTGCGTTCCAGAGATAGGCGCTGAACACTGGTCTGAATGTCATGCGGCGTATAAACATGATAAAGCCATTGTGCATTCGAGCTCTGGTCCCCTGGGGATCCCTCGTACCTTTGTGTAAAACATATTACCATATTTTAATCTATTCTGCATTTTTTTCCTCTACAATCAGTGTTTAAAAGGCAGAAGTCTAAAGATTGCGTTTATGTTTTCTTTTTATTAGTTTTCCTCAGTGTTGAGCATTATAGCCAATCACACGTTTCTGTTTGTGAATGCAGTGGCCAATCAGAGGTGTTTTGATTCATTACATAATTTATATACTTTATGTGGGCTATTTACAATACATTATACGATCGTTGAGTGTGCCACCTTTGAGCAGCATTAAACAGTTGGCGTAAATAAACATAAATGCCATATCAGATGCAGCTTCTGTTCCACTTTCACAGTGTAAAGATGCTTTTTGTTTTGTTGTTATTGGTAATATAGCAATAGCATTCTGAATGGGTAATGAGTTCAATTTAAGTATCTGACATAATACAGATACATTTAATAAGGTAATTATAAAAATTGCCTTTAAAAAA

Function

NR:

description
reverse transcriptase/ribonuclease H/putative methyltransferase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_03369379_03371121.mRNA True 1956 mRNA 0.46 4 3368919 3371441

Neighbor

gene id symbol gene type direction distance location
CI01000065_03159239_03164326 LARS2 coding downstream 204593 3159239 ~ 3164326 (-)
CI01000065_03113629_03136974 LARS2 coding downstream 231945 3113458 ~ 3136974 (-)
CI01000065_03060532_03105332 LIMD1 coding downstream 262744 3059417 ~ 3106175 (-)
CI01000065_03037531_03045960 SMPDL3B coding downstream 322959 3037361 ~ 3045960 (-)
CI01000065_03015397_03024204 NA coding downstream 344715 3014852 ~ 3024204 (-)
CI01000065_03373810_03377138 NA coding upstream 1262 3372703 ~ 3377138 (-)
CI01000065_03385522_03396519 FEZ2 coding upstream 14081 3385522 ~ 3397081 (-)
CI01000065_03413002_03434286 WDR26, WDR26.S coding upstream 41288 3412729 ~ 3434286 (-)
CI01000065_03442791_03477709 DNAJC27, ADCY3A, ADCY3 coding upstream 71154 3442595 ~ 3477709 (-)
CI01000065_03544613_03551034 NA coding upstream 173090 3544531 ~ 3551034 (-)
G269424 NA non-coding downstream 16016 3351600 ~ 3352903 (-)
G269348 NA non-coding downstream 63380 3304357 ~ 3312480 (-)
G269337 NA non-coding downstream 259364 3108288 ~ 3109555 (-)
CI01000065_02979795_02989709 BVES non-coding downstream 390327 2977843 ~ 2989763 (-)
G269304 NA non-coding downstream 418587 2949545 ~ 2950332 (-)
G269436 NA non-coding upstream 25669 3397110 ~ 3397359 (-)
G269440 NA non-coding upstream 65697 3437138 ~ 3437390 (-)
G269399 NA non-coding upstream 119131 3490572 ~ 3491380 (-)
G269446 NA non-coding upstream 124647 3496088 ~ 3496312 (-)
G269448 NA non-coding upstream 146295 3517736 ~ 3518149 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 2585258 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 2744262 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 2788892 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 3314532 50386 ~ 55774 (-)
G269679 NA other upstream 402439 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 421682 3793123 ~ 3806693 (-)

Expression


Co-expression Network