XLOC_010390 (CU469524.1)


Basic Information

Item Value
gene id XLOC_010390
gene name CU469524.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 4210477 ~ 4211935 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020433
cccctctcatttgggactgaggtttctgggacagagagatatgatttagtcaaggttgacagcagtgggtaacattgtgcattgtctttcccccacttgagaggacaagccatgagtaagatagaggtctctttgcggtacaagggctaatgtctgcattaatctaacaagtgtgctgtgttctgcagcccccatgactgtttttagtcgtattccccgacttatatttcaccacagtctggcagtgcctgcatactgtttttttctttgtctgtcaccttttctactttttcgtatctttttagaaagaaaccggaatgcttccacacatccgatttaaaacccgctttagtttagatcatttccagctctttttcttccccgctactagcaacacactccatttccacattactggatatgtagtgacaacagaccgcaaaggatgatggccacgcctagactgatgggaattgtagttcccgttacctcccattcgcttcattcgcctgagcaaacttttctcagaaatatagttttattgagtcatgcgactacggtaatattgaaaaaaattattattgtggtatgacggtatttacaatattgttacatccctagtcatCACAGAATAACAAAATGTTGTTTCCATTACATGCAGTGGGGGAAAATAAGTACTGAATc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096174

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020433 True 684 processed_transcript 0.41 2 4210477 4211935

Neighbor

gene id symbol gene type direction distance location
XLOC_010389 rrp15 coding downstream 7455 4196932 ~ 4203022 (-)
XLOC_010388 NA coding downstream 30510 4179036 ~ 4179967 (-)
XLOC_010387 si:ch211-175f12.2 coding downstream 179091 4010967 ~ 4031386 (-)
XLOC_010386 NA coding downstream 413844 3784874 ~ 3796633 (-)
XLOC_010385 GRIK3 coding downstream 531501 3463727 ~ 3678976 (-)
XLOC_010391 CU469524.2 coding upstream 22792 4234727 ~ 4267736 (-)
XLOC_010392 vegfaa coding upstream 75607 4287542 ~ 4317879 (-)
XLOC_010393 ppp1r8b coding upstream 301662 4513597 ~ 4531657 (-)
XLOC_010394 BX927222.1 coding upstream 315546 4527481 ~ 4527647 (-)
XLOC_010395 mrpl51 coding upstream 329046 4540981 ~ 4547193 (-)
XLOC_010626 CR392024.2 misc upstream 16683177 20895112 ~ 20895175 (-)
XLOC_010384 NA non-coding downstream 861768 3348006 ~ 3348709 (-)
XLOC_010380 NA non-coding downstream 1398469 2809717 ~ 2812008 (-)
XLOC_010378 CU929110.1 non-coding downstream 1474678 2735676 ~ 2735799 (-)
XLOC_010396 NA non-coding upstream 342136 4554071 ~ 4558497 (-)
XLOC_010399 NA non-coding upstream 473728 4685663 ~ 4695623 (-)
XLOC_010404 LO018201.1 non-coding upstream 849564 5061499 ~ 5061629 (-)

Expression


Co-expression Network