CI01000065_03589916_03598053


Basic Information

Item Value
gene id CI01000065_03589916_03598053
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3589771 ~ 3598146 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_03589916_03598053.mRNA
ATTTACCAGCCTTTAGTTTATGTTAAGTGTAGCAAAGGAATGCGCTATTTTATATAGCAAATATATTAAGCATTCCCCAGAACACAATCACGAATGGACCTTGTTTTCAGCAGTGACGGAAAAGACAGCTTCCCTCTTTGCCTCATTTCCTCAACATCCCGTGCCCCCTTGTTTGCCCAAGCCAATTTCAGCATAAATCCTTCTGATTCCTTAATGTCCCCTGAACAAGGCTTCACACCATGGGTGAATTCCCTGCCTGCTCATCTCTGCATTGTGCTCTGCCTAAACCTTCAAGAGAGATCTCTCCAGCAGGCCTGTTTGCAGCTGGTGGACCGGACCGCCTGGTGGGTGTTGGGAGGCACTGTGATGGGGCTGGTTTTTCTGGGGATCTGTGCCAGAACTTTCACAATGGGCTCCCTGATGGAGATCCTGATTGCAGATAAATGCAACACGAGCAATAGGGGTGAGGTTGGATGGAAGGGTTTGCCAAAGCTGTGTACAACACATTTCATCTTCTCATGTTGCAATGACCAGCATCTCATCATTGCCTATTGTCTTCAGCAAGCCATCATCATGTCATATCAAGAGCTTTTCTTTTATTCATCGGTGGAGAATGAAATGATTACACAAGTCACGTTCACCTGAGCGTAACACTAACAGAAAGAGGAAAATATTTTTTTTATTTTTTTCTGCTGGCATGATGGGAAGAGGTACATATCCCGGAGATCCGCCTGTATTGCCACCAATTTTCTTTTTTTAACTGTACATTAAACATGTGAATTTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_03589916_03598053.mRNA True 790 mRNA 0.44 4 3589771 3598146

Neighbor

gene id symbol gene type direction distance location
CI01000065_03544613_03551034 NA coding downstream 38737 3544531 ~ 3551034 (-)
CI01000065_03442791_03477709 DNAJC27, ADCY3A, ADCY3 coding downstream 112062 3442595 ~ 3477709 (-)
CI01000065_03413002_03434286 WDR26, WDR26.S coding downstream 155485 3412729 ~ 3434286 (-)
CI01000065_03385522_03396519 FEZ2 coding downstream 192690 3385522 ~ 3397081 (-)
CI01000065_03373810_03377138 NA coding downstream 212633 3372703 ~ 3377138 (-)
CI01000065_03602063_03603667 NA coding upstream 2616 3600762 ~ 3605308 (-)
CI01000065_03648940_03692253 TGFB2 coding upstream 50257 3648403 ~ 3692368 (-)
CI01000065_03694059_03694764 NA coding upstream 95661 3693807 ~ 3694764 (-)
CI01000065_03701147_03703052 RRP15 coding upstream 102985 3701131 ~ 3703052 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA coding upstream 195714 3793123 ~ 3806693 (-)
G269470 NA non-coding downstream 12033 3577489 ~ 3577738 (-)
G269463 NA non-coding downstream 35245 3554317 ~ 3554526 (-)
G269462 NA non-coding downstream 36658 3552889 ~ 3553113 (-)
G269461 NA non-coding downstream 37759 3551803 ~ 3552012 (-)
G269448 NA non-coding downstream 71622 3517736 ~ 3518149 (-)
G269629 NA non-coding upstream 41974 3640120 ~ 3640411 (-)
G269630 NA non-coding upstream 42607 3640753 ~ 3640997 (-)
G269645 NA non-coding upstream 116701 3714847 ~ 3715306 (-)
G269647 NA non-coding upstream 120337 3718483 ~ 3718687 (-)
G269650 NA non-coding upstream 125433 3723579 ~ 3723956 (-)
G269348 NA other downstream 277291 3304357 ~ 3312480 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 2806110 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 2965114 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 3009744 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 3535384 50386 ~ 55774 (-)
G269679 NA other upstream 175734 3773880 ~ 3774294 (-)

Expression


Co-expression Network