CI01000065_03602063_03603667


Basic Information

Item Value
gene id CI01000065_03602063_03603667
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3600762 ~ 3605308 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_03602063_03603667.mRNA
AGTGGGGAACAGCGGCCAGAGAGTGTGGGACCAGGATGGAGAGAGAGGTAAAAGAGAGGTCAGTGGGAGGAGAACAGGCTGTAGATTGGGATGAAGACGAAGTTTGTGGGGCTCTAAATGGAAGAAAGATGGAGAGGGAGAGTGAATGCAAAGTCTGAGAGGAAGACACTGCAAAAACATTATTTAAATTTTATCTGGTTTTCCAGTACAAATATCTAAACACTCTCAAATTAAGATGCATTTACTTGAGAAGCAAAACAACATAAGTCTAGATAACAAATCTTATTTTCTGAAATCAAAAATAAGTGATTTTACGCTCAAAATAAACTTAATTTGAAGGGAAAACATGTTTATTTTTCTTACCCCATTGGCAGAATCCACTTTTCAAGAGCTACATCAAATGGCTCTTTCGGACTACAATGCATTTTTTTTCCCGGAACCTGTGAAGTCACAATGTTACTCATTTAAATAATCTCCGCCCACTGAATCTGCAAAAAAGGGGGCGCTGTGCTAGAGAAGATGAAGAGTGTTGGGTCTGAATTGGCTCGAATTGGTTTTAAATTGATGCCATCCTTAATTATTTACACCAGAGCAGAACTTGCTGTTATGAAGGGCCGTGACATTTCCCGAACACGCGCTAAGCAGTACCAATCACAACACACTGGGCCAGCTAACCAATCACAGCACATTTCGTATTTCAGAAACAGGAACTAAACGGCACGTTAGAGACAGACTGGGGAGAGAGGATAATGTAAAATATGTGAAAAATAATGCATTTTTTGAACAACCAAGTATGAAAATATATTCTAGTACACCTAAAAACAAAATCAAGACTTTGTAAAAGGGCATAATAGGACCCCTTTAATGTTTCAGAAAACAAGACATGATATCTTAAAGGGTTAGTTCACCCCAAAATGAAAATTCTGTCATTAATTACTCAACCTCATGTTGTTCCAAACTCGTAACTTAAAGGACCCTTGGAGACTCCAAAAGGATACCACAAAGTACTTCTACCTGGCAGTCAAAGCGGCATTACGTCACGAAAGTGCGGACTCAGAGGAAGATCATGAGGGTTTAGGGTGCAATTTGGGATAGGGCTCAAATAACCAAATGATATAAGGAGTCCATATAATTCTATTATATAATAAATGTATGCACACCAAAGAACCTGTGAAAAAAATTTAAAAATTACAGAAAAAAATACAGAATTACAGAATTCAGTGTAGGCTATAGTATGTCTACAGACCAACAGCTTGTTTTCATTTTAGATGAGTCAAGCTGCGATACCGAACAGGACCACATGGAGATGCCAAAAAACTAAATCAACCGCCTTTTCCTGACTGCATAAACCAGGGGTCCCCAAACTATGGCCCGCCCCCACATTTGGACCGGCCCTCTGAACAAGCCAAAGATGTATTTTGTTTTAATCATATTATATCTGTATTTGCTTATAAAAGGTTAACTATTACAATTTACCTTAGTTATTAAATAATTATTAACGTAGCGTAGCCAGATTATTTGTTAGATTCACCCACCAATAGATTCGTACATTCAACATAACGTTCCATCGTGATCGAGCAGGTGCTACCGACCTATGGCAGGTGCGCGCAAGCCAGAAAGAAAATTCAAAGAGACAACAAAATGGCCAAACGGTTTGGAAAGAGAAAAGATGATTTACAATGCAGGGTATTTAACCCAAAGGGGACAAGTGATTATTTTTTGTTCAATGCAAAGAAATGGCTGTCAAGTGTCTGTGTTCAAAGAATACAATCTGCACCGAGTCTCCGACACTATGAAACCCGCCGCATAGACAAGTATGCAGTTCCAAGCCTAGAGTCTGCTCATGGAGATGTGCTTTACCACACTGAAGTCCGACGGTTAAGCCAGGGGAGAGTTTTGAGGCGCTTTTACGAGCTGCTACCTGAAATCAATGCTTTTCTTCTGAGAAAGGGCAAAACTGTCCCAGAACTGATTGACACAGAATGGAAATGGGACCTTGCCTTTTTAACAGATGTGACAGAAATTTTGAACAGCCTCAACTTGCAGCTCCAAGGCAAGGGGAAACTAATATGTGACATGTATTCCCACATAAAAGCATTTGAAGTGAAACTAGCACTGCTTGCAGGACATGTGCAAAAGCAAGACCCATCTCCTTGTTACCCAAAGCCTCTCAGCTGAGAAACCAGTGGCCCCATTCCCAGCTGAAAAGTCCATGGCAGCGCTGGAAATGCTGAAGGCGAAGTTTGATATGCGATTCGAAATTTGCCTTTTCCAGAACCCCTTTGCTGCCGATATTGACAAAGCCCTGCCTTCTTATCAGTTTGAGTTGGCTGAGTTACAGAACTGTGATGTTCTGAAAGACGCATTTAAGCCCAACACTCTCACTGAATTCTACGCTGCCCTTCCTAACGAGACATACCCAAACATCAAAAGGCATGCAATGAAGATGTGCACGCTTTTTTGGCAGCATGTATATCTGTGAGCAAACCTTTTCACGCATGAAACTGATGAACAAGACTTACTGATGAATATTTGCATCAGTCTTTGGCTGTTCACACAGCAGCATAATACGGTTGTCAGTCCTGTATTTGAGTCGGTTACGTTCACACAGAGTACAGTTATCTACGGGAGTGACAACCGCATTCTATAACCGAACTCACACCAGTAAATTTTCAGTCGGCCTGAAACTAATCAAGTGTGTCACCCAGAGACTGACAGAAACTTTAACCCAGTGTTACAGTACTGTTTTTTTTTTACAGCTCATGGCAATATAAGCAGCATAAATCTGGCAATTGAGATATTCATGCTTTCGTTTCTCAGTTGTATCATCTTAGCGGTGTGGGAAGTTCACTCCGATTACTAAGCACTGGACTTGCCAGAAACAAGGCTGCTGATGCTGCATAGTGAATCATTTGCATAAGTTTGCAACTTTTCTGAATGACTTTAGCAAAAATATGCACTCATGCAAGTCCTAGAGTCACTTATAAGATCATTTCCCTTCCCTGCCTTCACATCAACTTATAGGCCTACACAGAAATGCAAAAGATGATTAGTGTCAACATAGAGGAAGGGTTTGTGGTTTTTGCGCAGAATGGATGAAAGAGACGAGAAATGACGATGAAACACTGGTCGAGGAAACATGAGAAGAAGTTTCTTACTTTTGGCTCCACCTTTACACTGTTTCTCCCCTTTGCTCTGTTTTGCAATTTCAATGGCTTTTGCTCATCAATAGTCTGCACAATGTGCACAGTGGTCATGTAGATTTCAAATCAGTTTGAAATTTGTCACGGCGTGTGCAAAGTGTGTTGGAGATGGACATGTGCTGTGGGTTTTAAATCGCAGACAAACATGAAAGGCAGATGAGCTTCAGTCTGTTAATGTGTGCTTGGCTTGTAGCAGTTGTTCTCAACTGATTTTGCTCCAGGAGCCTGATTTTACATCGGATATAGTACTAAAATTAATCAAACATTATAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_03602063_03603667.mRNA True 3479 mRNA 0.41 2 3600762 3605308

Neighbor

gene id symbol gene type direction distance location
CI01000065_03589916_03598053 NA coding downstream 2616 3589771 ~ 3598146 (-)
CI01000065_03544613_03551034 NA coding downstream 49728 3544531 ~ 3551034 (-)
CI01000065_03442791_03477709 DNAJC27, ADCY3A, ADCY3 coding downstream 123053 3442595 ~ 3477709 (-)
CI01000065_03413002_03434286 WDR26, WDR26.S coding downstream 166476 3412729 ~ 3434286 (-)
CI01000065_03385522_03396519 FEZ2 coding downstream 203681 3385522 ~ 3397081 (-)
CI01000065_03648940_03692253 TGFB2 coding upstream 43095 3648403 ~ 3692368 (-)
CI01000065_03694059_03694764 NA coding upstream 88499 3693807 ~ 3694764 (-)
CI01000065_03701147_03703052 RRP15 coding upstream 95823 3701131 ~ 3703052 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA coding upstream 188552 3793123 ~ 3806693 (-)
CI01000065_03845250_03848939 NA coding upstream 238219 3843527 ~ 3848941 (-)
G269470 NA non-coding downstream 23024 3577489 ~ 3577738 (-)
G269463 NA non-coding downstream 46236 3554317 ~ 3554526 (-)
G269462 NA non-coding downstream 47649 3552889 ~ 3553113 (-)
G269461 NA non-coding downstream 48750 3551803 ~ 3552012 (-)
G269448 NA non-coding downstream 82613 3517736 ~ 3518149 (-)
G269629 NA non-coding upstream 34812 3640120 ~ 3640411 (-)
G269630 NA non-coding upstream 35445 3640753 ~ 3640997 (-)
G269645 NA non-coding upstream 109539 3714847 ~ 3715306 (-)
G269647 NA non-coding upstream 113175 3718483 ~ 3718687 (-)
G269650 NA non-coding upstream 118271 3723579 ~ 3723956 (-)
G269348 NA other downstream 288282 3304357 ~ 3312480 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 2817101 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 2976105 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 3020735 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 3546375 50386 ~ 55774 (-)
G269679 NA other upstream 168572 3773880 ~ 3774294 (-)

Expression


Co-expression Network