CI01000065_03845250_03848939


Basic Information

Item Value
gene id CI01000065_03845250_03848939
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3843527 ~ 3848941 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_03845250_03848939.mRNA
AAATGAGTGTAATTCATGTATTGTCTCTTGGCATTCACAACTTCCCTATGTCAGATCAAATGAGCACATGCTCATGGAAAACCGATGCCCATTATGCATCACAGAACATCCATCCCATTAATCATCTAACATGGGTGTTGTTGAAGCAGATGCCGATTGTGATGGATGGTGTTTACACGTTGGCTACATCTTCACCCACAGATAAATTCACAATCAATCGTGCCGCTGAGTTACTCCGCCAGGCCTTTAAACATTACTTCAGGATGGCTATAATGCTTAGGCCCCCGTGGTGGTCTGGGGAGGAATCAGACCCAGCGGAGGTCAGTCGGCTGGGGGAGGGGAGCCGCTGGTCATCCAATGTGTCTCAGGGTGGACCCAGATATTGTGAACTTCCTAATTACTTCAAGAGCAGCACTATTCTGCAGGGACTGCTTACACAACAGAAGGGAGAGTACAACACGGAGCAGCTCTTATGTAAGAGACATCCTTCCAGAGTAAACATGTTTTTCTGCGCTGATATTTTTGACACCCGTGACTTTTATCTGACTTTTATCAGCAGATTTGCTTTTTCGCACCATAAACAGCTGGGCTGCTCTGAAGTGCTGAGAGTAACTATGGTGAAGAGTTTTTTTTTTTAGCATCAAGTACCATGACGGTACATAAATAGGGCTGAACCCTGAGGCCCTTTTCACCCCCATCCTGTTAGCACTGCTGTCCAACAACAGGCTGCAAATTTATATGAAAAACTCAGTGCTCTGTTGGATCAGTCTAGTTATTTATTTGTTTATTTTTTAAACTCCAAAAAGATACCTATGCAATCAATTTGCTGCAGTTTACAGCTGAAATGAATACCAACAACAAGTAAAACACCAATGACTTTTATTTCCTTTTCACACAAATAATGATTACAGGGGCATTTTATCGATTAATAAAGACTTCTTTTTACATGGTTCCTTGCACAATACTATGTTATGACCTCAATGCACTTTACCATTCGGCATGATTTGTAAACTAATACTTTTTAAATTTTGCATCACATAACCAGTTCCATATGTATGGCTTTTCTAATGTAGTAAACTTTTTCTGTAGCTCACCTGGTACAGCATTAAGCTTTTCACACCACCAGTGACTTTGTCGCTGCATATCTCCAGTGGCTGGTGGTTGGGTTGCTAGTGGGCGTTCCCACTACTGGTTGCCAAGTAATGTTGGGAATGACACTCACAGACAACAAATTAGATTGCTTGCAGCTAAAACCAAACATTTTGGAGGGAAAAGACTAAATATAAATGGAATCAGTACATAAAATGCTTAAAGGGTAAGTTCACCCAAAAATGAAAAGAAGTCTGTAAGACTTTCGTTCATCTTCGGAATACAAATTAACCCTCTACCGCATGGTGTTGCCATATGGCAACATACTCTTTGCGTTCATTTCCTTGCCACTGTCTCTTGAAGAGAATATTCTCGTTTTTTTTTTTTTTGTTGGTAAGAGAAGACCTTAGTTTAGACAATGATGTGCTTTGGTTAAGTCACATGACATGCAATTTTTTTCTGTGGCGCAATTTCTGACAGACTGCCGTCTCTTGTCGGTAGTTGCTGAAAGCAAACTAAAACGTCAGTAACAAACAAGGACCCGCCCATGTCACATTCACAAAAAACATCATCTCAGGTAAGTTATGATGACATATTCACCACTCAAAAAAGTTTTTATGAAAATAGTTTTTGGTAAATCGAGAAAATGTCTGTGTTGCCATATGGCAACACTGTGCAATAATGGAATGACATTATTGTAATAGGTTAGCTAGCTAGCAAAGGTCAGCTGCAGTCTGTTAAGCTGTAACAATAACAACATTAATGCTAGTGATATAATGTTGATTAGTCGTATGTTAAGGACTGCCATGGCATTTGTATTATGGATTAAATCAACATCGGAGACCTGCCTGCCCACTGCCACCACAGCCAGTACTACTGGACCAGACCAACCACTGGCCTACCATGGTGTCTCAAAAAGGCAGGTGCAAGTGGCTGTAAGTGTATTGTTAGGGTGAAGTGCACCAAATGTAATGTGTACCTGTGCCTCACCTCTTAAAAAAAATGTGTTTTGAAGTTTCGTACAGAAAAAAGGTGAGGTTTCAAGGATTATGGGGGGTTCATGTTCATAACCTTCCTCTCATAAGATTGCGTAATGTTGAATTTTCAAGAACTGCAATGTTTTTGGTTTTATGTCAATGTTTTATGATACATGATAAACAGTATTATATTTGTTTTTAACTGTCTAAATTTGCAATTTAAGTAATATTCATGAAAAACGTAATGAAATTCAAAGAATATAAAGCATTATCCAGCAAAAGAGAATGGAATAAA

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_03845250_03848939.mRNA True 2361 mRNA 0.39 2 3843527 3848941

Neighbor

gene id symbol gene type direction distance location
CI01000065_03794501_03806693 VEGFAA, VEGFA coding downstream 36834 3793123 ~ 3806693 (-)
CI01000065_03701147_03703052 RRP15 coding downstream 140475 3701131 ~ 3703052 (-)
CI01000065_03694059_03694764 NA coding downstream 148763 3693807 ~ 3694764 (-)
CI01000065_03648940_03692253 TGFB2 coding downstream 151159 3648403 ~ 3692368 (-)
CI01000065_03602063_03603667 NA coding downstream 238219 3600762 ~ 3605308 (-)
CI01000065_03935077_03938904 NA coding upstream 86077 3935018 ~ 3938904 (-)
CI01000065_03944604_03949933 NA coding upstream 95640 3944581 ~ 3950187 (-)
CI01000065_04027497_04039742 PPP1R8B, PPP1R8 coding upstream 177569 4026510 ~ 4039742 (-)
CI01000065_04070422_04072088 NA coding upstream 221263 4070204 ~ 4072088 (-)
CI01000065_04178828_04180116 NA coding upstream 329017 4177958 ~ 4180116 (-)
G269690 NA non-coding downstream 25942 3817380 ~ 3817585 (-)
G269687 NA non-coding downstream 54652 3788413 ~ 3788875 (-)
G269686 NA non-coding downstream 56609 3786636 ~ 3786918 (-)
G269672 NA non-coding downstream 83329 3759983 ~ 3760198 (-)
G269665 NA non-coding downstream 92468 3750820 ~ 3751059 (-)
G269738 NA non-coding upstream 56611 3905552 ~ 3905784 (-)
G269739 NA non-coding upstream 56866 3905807 ~ 3906059 (-)
G269755 NA non-coding upstream 65146 3914087 ~ 3914519 (-)
G269771 NA non-coding upstream 76359 3925300 ~ 3925625 (-)
G269776 NA non-coding upstream 79543 3928484 ~ 3928707 (-)
G269679 NA other downstream 69233 3773880 ~ 3774294 (-)
G269348 NA other downstream 531047 3304357 ~ 3312480 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 3059866 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 3218870 622123 ~ 624657 (-)

Expression


Co-expression Network