Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000065_03935077_03938904 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000065 |
| NCBI id | null |
| chromosome length | 4956624 |
| location | 3935018 ~ 3938904 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| pol polyprotein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000065_03935077_03938904.mRNA | True | 833 | mRNA | 0.45 | 5 | 3935018 | 3938904 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000065_03845250_03848939 | NA | coding | downstream | 86077 | 3843527 ~ 3848941 (-) |
| CI01000065_03794501_03806693 | VEGFAA, VEGFA | coding | downstream | 128325 | 3793123 ~ 3806693 (-) |
| CI01000065_03701147_03703052 | RRP15 | coding | downstream | 231966 | 3701131 ~ 3703052 (-) |
| CI01000065_03694059_03694764 | NA | coding | downstream | 240254 | 3693807 ~ 3694764 (-) |
| CI01000065_03648940_03692253 | TGFB2 | coding | downstream | 242650 | 3648403 ~ 3692368 (-) |
| CI01000065_03944604_03949933 | NA | coding | upstream | 5677 | 3944581 ~ 3950187 (-) |
| CI01000065_04027497_04039742 | PPP1R8B, PPP1R8 | coding | upstream | 87606 | 4026510 ~ 4039742 (-) |
| CI01000065_04070422_04072088 | NA | coding | upstream | 131300 | 4070204 ~ 4072088 (-) |
| CI01000065_04178828_04180116 | NA | coding | upstream | 239054 | 4177958 ~ 4180116 (-) |
| CI01000065_04318691_04330504 | NA | coding | upstream | 379531 | 4318435 ~ 4330782 (-) |
| G269780 | NA | non-coding | downstream | 836 | 3933983 ~ 3934182 (-) |
| G269776 | NA | non-coding | downstream | 6311 | 3928484 ~ 3928707 (-) |
| G269771 | NA | non-coding | downstream | 9393 | 3925300 ~ 3925625 (-) |
| G269755 | NA | non-coding | downstream | 20499 | 3914087 ~ 3914519 (-) |
| G269739 | NA | non-coding | downstream | 28959 | 3905807 ~ 3906059 (-) |
| G270154 | NA | non-coding | upstream | 69027 | 4007931 ~ 4008235 (-) |
| G270157 | NA | non-coding | upstream | 73014 | 4011918 ~ 4012132 (-) |
| G270125 | NA | non-coding | upstream | 107443 | 4046347 ~ 4051738 (-) |
| G270195 | NA | non-coding | upstream | 197920 | 4136824 ~ 4137054 (-) |
| G270197 | NA | non-coding | upstream | 199929 | 4138833 ~ 4204783 (-) |
| G269679 | NA | other | downstream | 160724 | 3773880 ~ 3774294 (-) |
| G269348 | NA | other | downstream | 622538 | 3304357 ~ 3312480 (-) |
| CI01000065_00782736_00793467 | NT5C3A, NT5C3 | other | downstream | 3151357 | 782697 ~ 793467 (-) |
| CI01000065_00622545_00624625 | NA | other | downstream | 3310361 | 622123 ~ 624657 (-) |
