CI01000065_04470763_04478735


Basic Information

Item Value
gene id CI01000065_04470763_04478735
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 4469999 ~ 4479108 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_04470763_04478735.mRNA
CGCCCCCCACATGTCGATTAACCGGTGGGAACATTTTCTCACCGTCACATCCCTAATTCAAATGAATAAATGAATAAAATGTGATTAAAAAAATATTATAATGTAACTTATAATAAATAAACTGATTTTAGATATATAATATTAATACTTAAGTGTATACATTTGGGTTTTTATAAAAGATAGATGTCTTTTAAATGTTAGGATCGGGGTCCTTAACACTAAGATGATCATATTTTGGGGTCCGTGGAATTCGGGTCTAGGTAGAGTTACGTGTGTCAATCAAAACTCCTCCCACGCGTTCAGCCAATCAGAGCAGCAGTGGTCCATGTGAGTGTTGACGTCAGCACGCTTTTCCTGCTTGGTTTCCAGCGCAATGGCGGCTACGCGGCTCTTCTTGAGAACTTCAGGCGTTAAGTCTTCATTAACCGGGTTAACCGGTGGCGTGCACAGCAGTTTGGGGTTAACTCTGCTTAAACTGTCTCCCGACTGCACAGCCAAGCCGAAAGCACAGAGAAGACATGCAGCGCACTTCACCTATCATCCTGACCCTGTGCCTACTCAGTATGGCCCCACACAGAAGATGAATTTGTTCCAGTCAGTAACCAGTGCCTTGGACAACACGCTTGCCAGTGATCCCACCGCAGTGATTTTTGGTGAGGATGTGGCGTTTGGTGGGGTGTTTCGATGCACAGTCGGCCTCCGAGATAAATATGATGGCAGCACTGTCACACTCCTGGCTATCACAATCAAACATTTGCTTACTGTTGACTGTGCACTGCGTACTTTAACATAAGGCTATACACAGTAAAGAGTAGGCAAGTAAGTGTGAGTGGTGTCAGTTATTAACTTGGAAATATAAATGCTGAACGTTTTAAAATGTTAATTTTAAAACTTGATATTTTTTAGTTTGGTGTAAAAATGTCATACCTTTTAGGAGAGAAAAGAAAGTCGAGGAAGAGATGTCTAAAAAAACAAAACTAAAACCATATTTTTTTCCATTTATTAAAATAATAATAATTATTATTATTAATAAATTAAAATTAATATTATGAAAATTATTTTCATTATGTGAAATAAAATAAACATTAACAAAAGTAAGATAATATATAAAAACTTTTTAGTTTTAATTATTTTATTTCATTATTTTAACTAAAAAACTAAATCAACTAAATCATATTAAAACAACATAGACTTTTTTTTAAAGTAATAAAAATAGCAAAACCACAAAAAAAAAAAAAAATATATATATATATATATAAAATATAACATTATATATATATATATATATAATATATATATCATAATATAATAAAAATCTAATTCAAAGTATTAACAAAAATTAAACAAAAACTAAATTAACACTGGCCTGAAATCCCTTCCTTTGGACAATCAAGGAGAGTGCATTGCATTGTGGGATGCAGTAGTCTGTTGTATTTGGTCATTTGGTATCTATCTTGATGGTGATTATTTGCTTTTATGTTAATCTGCTATATTAAGAGGTGTTCAGTGTGCTCAAAATTGCAACTAAAATTTGAAAGCTGCATAAATCAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_04470763_04478735.mRNA True 1557 mRNA 0.33 4 4469999 4479108

Neighbor

gene id symbol gene type direction distance location
CI01000065_04318691_04330504 NA coding downstream 139217 4318435 ~ 4330782 (-)
CI01000065_04178828_04180116 NA coding downstream 289883 4177958 ~ 4180116 (-)
CI01000065_04070422_04072088 NA coding downstream 397911 4070204 ~ 4072088 (-)
CI01000065_04027497_04039742 PPP1R8B, PPP1R8 coding downstream 430257 4026510 ~ 4039742 (-)
CI01000065_03944604_03949933 NA coding downstream 519812 3944581 ~ 3950187 (-)
CI01000065_04484009_04501087 TTK coding upstream 4901 4484009 ~ 4501087 (-)
CI01000065_04507862_04513517 DCTN3 coding upstream 28754 4507862 ~ 4513517 (-)
CI01000065_04657955_04662886 NA coding upstream 178501 4657609 ~ 4663107 (-)
CI01000065_04705952_04710430 NA coding upstream 226791 4705899 ~ 4710588 (-)
CI01000065_04876578_04886460 NA coding upstream 396671 4875779 ~ 4887207 (-)
G270242 NA non-coding downstream 96785 4372764 ~ 4373214 (-)
G270240 NA non-coding downstream 98857 4370808 ~ 4371142 (-)
G270288 NA non-coding downstream 133535 4336207 ~ 4336464 (-)
G270287 NA non-coding downstream 133816 4335857 ~ 4336183 (-)
G270268 NA non-coding downstream 155962 4298982 ~ 4314037 (-)
G270311 NA non-coding upstream 4182 4483290 ~ 4483633 (-)
G270345 NA non-coding upstream 96331 4575439 ~ 4575701 (-)
G270404 NA non-coding upstream 174587 4653695 ~ 4655279 (-)
G270442 NA non-coding upstream 284974 4764082 ~ 4764604 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other downstream 659756 3793123 ~ 3806693 (-)
G269679 NA other downstream 695705 3773880 ~ 3774294 (-)
G269348 NA other downstream 1157519 3304357 ~ 3312480 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 3686338 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 3845342 622123 ~ 624657 (-)

Expression


Co-expression Network