CI01000065_04672707_04680741


Basic Information

Item Value
gene id CI01000065_04672707_04680741
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 4672639 ~ 4681582 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_04672707_04680741.mRNA
GCATAAATAAGCTTGAAAACAATGCTTTACTTCTCAAGATTCTGTCGATCAGGAACATTTACCAAATAATGCTCTCATTGAAGACAAAGAAAATACTTAAATTGACACAAAAGATTCAGGCAGTAGTAAATCAACCCTCTGGGCGTGTGGTTGCTATGGGGAAGACACTTGTACCTGTAAGACCGACAGTCCAAAAGCCTCCTGCACACCCTATTATCCCAAACACAGTAGAAGTTGATCTAGCCAAACATGAAAAGAAGCTCTTGTTTCTTCACTGCATTCCCCTGTCATTCTCCCCGATGTGCCCCCCTCTTTTCCGCTTGCCCCGTCCTGCACGCCGCGGGGAGAATTCGTTTCAGACGGGGTGGTTCCGTCCACTTGGGGAAGACATGGTGGTGCGGTTAGACTGCTCACCCGGGCCTGTTCAAACATGCATTATCAGAAGAGTCTGGACATGGGTGATATTCTGGGAGACCGGTTCTGGCGCAGCAGCAAGAAAGGTGCTGGAGGTTAGAGGTGACACCATGACTTCTGATGGGATAGACTGCACTGGTGTCGACACTTTTTCACTTGGGACAGCTGAATCCCTGTCCCCAACTCCACTTACAGTACTAGCCATGGGCTAAGAGACTGAACTTTTTATAAGTCTGAATGTGTTATCTGCTTCCTAATTATAATGTGTGTAACTACATTTGATTGAAGGATGATCTATATCTATTATGTTTTTTTTTTATCATCTATTATATATTTTTTCCTTTTATTCTCTTTTTTTACTTGTTTTAGAGACTAAATGAAAAACAAAAACTATTTGTTGACTTCATTGTTTGCAGATATGTGGTTGGAAAGCTAAATAGTGTAGTGTGTACTTTAGAGAGGCTGTTAATAGTAGGTGTGTGTTCTGTGTGCTCAGCATGATTTGCATTCTACATCAATATTGCAAATCATATTCAACTGTTCATTCAGCAGATCGAAAGAGTATTCAGTTTAGATTCTTTAGAAGATGAGCTGAATATGAATCATAGACATCCATGCAACAAAGATGAGGCTTCCATAGCCTTGAAATGACTGACAAATTCTCATGTGGCACTCATCTGTTTTATGTTTCTGCCAATCACATCTGATTCCATTTACGTCTCCTCAGAATTTGCATCTCTTTTAGGACTGAAAGTGACTTGGACGAAGTCGTTCGAAAGTTGAAACTGAAACTTAATATGATCATTTTAAAAAAAGTAAGAATGTCTTTAATTATATTCCAGCTGACGGGTCTCTCTGTTGCCACGGACACATGCAAAACTGACCTCTGGGGCATGTCGACCTTTGTCAGCGGGCTGAAGGAGGAAGGCACGTGTTTCTAAACCCTAGTGAACACTTAACAGTGGGAGGAGAGCCAGATAATGTCTATTCTGGGCAAACTGTGCTCACATACAAAGAGCTAAAGTGATCCAAATGGAGAGCTTGGATTCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_04672707_04680741.mRNA True 1467 mRNA 0.41 3 4672639 4681582

Neighbor

gene id symbol gene type direction distance location
CI01000065_04578385_04586426 ECHDC1 coding upstream 86185 4577840 ~ 4586454 (+)
CI01000065_04561164_04574594 NA coding upstream 97983 4561118 ~ 4574656 (+)
CI01000065_04547859_04555579 SOGA3 coding upstream 117060 4547859 ~ 4555579 (+)
CI01000065_04520939_04539169 ELOVL4, ELOVL4A coding upstream 133378 4520848 ~ 4539261 (+)
CI01000065_04361047_04363753 NA coding upstream 308800 4360937 ~ 4363839 (+)
CI01000065_04684547_04687726 NA coding downstream 1838 4683420 ~ 4687726 (+)
CI01000065_04723206_04763909 NA coding downstream 41624 4723206 ~ 4763975 (+)
CI01000065_04775143_04786346 NA coding downstream 89555 4771137 ~ 4786876 (+)
CI01000065_04790849_04819273 MACF1B coding downstream 107997 4789579 ~ 4819537 (+)
CI01000065_04844180_04849353 NA coding downstream 162598 4844180 ~ 4849831 (+)
G270001 NA non-coding upstream 146425 4515754 ~ 4526214 (+)
G270062 NA non-coding upstream 160031 4502213 ~ 4512608 (+)
G269999 NA non-coding upstream 167520 4500293 ~ 4505119 (+)
G269967 NA non-coding upstream 293137 4376057 ~ 4379502 (+)
G269966 NA non-coding upstream 301445 4370806 ~ 4371194 (+)
G270090 NA non-coding downstream 28427 4710009 ~ 4714110 (+)
G270054 NA non-coding downstream 101287 4782869 ~ 4784552 (+)
G270098 NA non-coding downstream 143205 4824787 ~ 4825329 (+)
G270100 NA non-coding downstream 147078 4828660 ~ 4828880 (+)
G270036 NA non-coding downstream 186890 4868472 ~ 4870254 (+)
G269225 NA other upstream 1119515 3552804 ~ 3553214 (+)
G269181 NA other upstream 1209711 3458957 ~ 3462928 (+)
G268805 NA other upstream 2034434 2608907 ~ 2638205 (+)
G268525 NA other upstream 2432641 2239159 ~ 2239998 (+)
G267577 NA other upstream 3589984 1082153 ~ 1082655 (+)

Expression


Co-expression Network