XLOC_010394 (BX927222.1)


Basic Information

Item Value
gene id XLOC_010394
gene name BX927222.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 4527481 ~ 4527647 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020438
ATGCACCAGATACTGACCTGTCTGCCAGCAGCTCAGTTTTTTTCACACTGATGCCTGCATGACTGTGGCTGTCAGGTCCAAACCGGTGCAACAAAAAACACAAGACCCTGAGATTTAAGCCCTGAGAAAGAGGAACTCCTCAGGTGTTATAACTCAAGGGCACATCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000085786

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020438 True 167 scaRNA 0.48 1 4527481 4527647

Neighbor

gene id symbol gene type direction distance location
XLOC_010392 vegfaa coding downstream 209602 4287542 ~ 4317879 (-)
XLOC_010391 CU469524.2 coding downstream 259745 4234727 ~ 4267736 (-)
XLOC_010390 CU469524.1 coding downstream 315546 4210477 ~ 4211935 (-)
XLOC_010389 rrp15 coding downstream 324459 4196932 ~ 4203022 (-)
XLOC_010388 NA coding downstream 347514 4179036 ~ 4179967 (-)
XLOC_010395 mrpl51 coding upstream 13334 4540981 ~ 4547193 (-)
XLOC_010396 NA coding upstream 26424 4554071 ~ 4558497 (-)
XLOC_010397 arnt coding upstream 42770 4570417 ~ 4610278 (-)
XLOC_010398 cyp4t8 coding upstream 88014 4615661 ~ 4640578 (-)
XLOC_010399 NA coding upstream 158016 4685663 ~ 4695623 (-)
XLOC_010626 CR392024.2 misc upstream 16367465 20895112 ~ 20895175 (-)
XLOC_010386 NA non-coding downstream 730848 3784874 ~ 3796633 (-)
XLOC_010384 NA non-coding downstream 1178772 3348006 ~ 3348709 (-)
XLOC_010404 LO018201.1 non-coding upstream 533852 5061499 ~ 5061629 (-)
XLOC_010405 CU694364.1 non-coding upstream 579651 5107298 ~ 5107417 (-)
XLOC_010408 NA non-coding upstream 642128 5169775 ~ 5173443 (-)

Expression


Co-expression Network