CI01000065_04939969_04941719 (NDUFA3)


Basic Information

Item Value
gene id CI01000065_04939969_04941719
gene name NDUFA3
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 4939890 ~ 4941766 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000065_04939969_04941719.mRNA
AGAGCGAGTGCGTCACCAACATTTGTTCTTGAACTGCAATTCCCATGATGCCTGAAGCAAAGGACTACAGAGGCAAACATGGCGGGCAGTTTTTGAAGAATGCTTGGAATAAAGAGCCTGTGATCACAGTTTCCTGTGGACTCGGACTGCTGGCTTGCATTCTGCCGGCTGTGAGCCCTTTCACAAAGTACACAGGAATGATGAACAGAGCAATTCCATTTAATTATCCAGTCCCGGTTCGAGATGATGGAAACATGCCAGACGTTCCAGCGCACCCATGTGACCCACAGGGGAGAAGCTTGGAGTGGCTGAAAAACCTGTGAAAAGTCCTTCAGAATCCTGTACAGTCCAAACCCTCCTTTACTTCTGTCTCACTAGATGGATTTCTCTCAATAAA
>TU306934
CAAAGGACTACAGAGGCAAACATGGCGGGCATTGGCAGGTTTTTGAAGAATGCTTGGAATAAAGAGCCTGTGATCACAGTTTCCTGTGGACTCGGACTGCTGGCTTGCATTCTGCCGGCTGTGAGCCCTTTCACAAAGTACACAGGAATGATGAACAGAGCAATTCCATTTAATTATCCAGTCCCGGTTCGAGATGATGGAAACATGCCAGACGTTCCAGCGCACCCATGTGACCCACAGGGGAGAAGCTTGGAGTGGCTGAAAAACCTGTGAAAAGTCCTTCAGAATCCTGTACAGTCCAAACCCTCCTTTACTTCTGTCTCACTAGATGGATTTCTCTCAATAAAAGCTC

Function

symbol description
ndufa3 Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Orthologous to human NDUFA3 (NADH:ubiquinone oxidoreductase subunit A3).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000065_04939969_04941719.mRNA False 397 mRNA 0.47 4 4939895 4941766
TU306934 True 352 lncRNA 0.48 4 4939890 4941709

Neighbor

gene id symbol gene type direction distance location
CI01000065_04876578_04886460 NA coding downstream 52688 4875779 ~ 4887207 (-)
CI01000065_04705952_04710430 NA coding downstream 229307 4705899 ~ 4710588 (-)
CI01000065_04657955_04662886 NA coding downstream 276788 4657609 ~ 4663107 (-)
CI01000065_04507862_04513517 DCTN3 coding downstream 426378 4507862 ~ 4513517 (-)
CI01000065_04484009_04501087 TTK coding downstream 438808 4484009 ~ 4501087 (-)
CI01000065_04948358_04950696 MRPL51 coding upstream 6137 4947903 ~ 4950826 (-)
CI01000065_04953684_04953866 NA coding upstream 11415 4953181 ~ 4954390 (-)
G270500 NA non-coding downstream 43953 4895718 ~ 4895942 (-)
G270498 NA non-coding downstream 47240 4892424 ~ 4892655 (-)
G270481 NA non-coding downstream 66042 4873607 ~ 4873853 (-)
G270480 NA non-coding downstream 66566 4873117 ~ 4873329 (-)
G270366 NA non-coding downstream 69635 4868741 ~ 4870260 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other downstream 1129652 3793123 ~ 3806693 (-)
G269679 NA other downstream 1165601 3773880 ~ 3774294 (-)
G269348 NA other downstream 1627415 3304357 ~ 3312480 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 4156234 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 4315238 622123 ~ 624657 (-)

Expression


Co-expression Network